Difference between revisions of "ADENOSINE DIPHOSPHATE RIBOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE--TRNA-LIGASE-RXN SERINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSINE_DIPHOSPHATE_RIBOSE ADENOSINE_DIPHOSPHATE_RIBOSE] == * smiles: ** C(C3(C(C(C(N2(C1(=C(...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE--TRNA-LIGASE-RXN SERINE--TRNA-LIGASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSINE_DIPHOSPHATE_RIBOSE ADENOSINE_DIPHOSPHATE_RIBOSE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP([O-])(=O)OCC4(C(O)C(O)C(O4)O))(=O)[O-]
 
* common name:
 
* common name:
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** ORF
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** ADP-D-ribose
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** structural_maintenance_of_chromosomes_protein_6
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* inchi key:
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* ec number:
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** InChIKey=SRNWOUGRCWSEMX-TYASJMOZSA-L
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** [http://enzyme.expasy.org/EC/6.1.1.11 EC-6.1.1.11]
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* molecular weight:
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** 557.303   
 
* Synonym(s):
 
* Synonym(s):
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** adenosine diphosphate D-ribose
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** adenosine 5'-(5-deoxy-D-ribofuranos-5-yl diphosphate)
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[ARDP]]
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** 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[SER-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-SER-tRNAs]][c]
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* [[RXN0-1441]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 ATP[c] '''+''' 1 L-serine[c] '''+''' 1 a tRNAser[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-seryl-[tRNAser][c]
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* [[3.2.1.143-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1684]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10015]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1682]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_587]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 20762-30-5
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12292 12292]
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* BIGG : adprib
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03662 R03662]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49791958 49791958]
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* UNIPROT:
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* HMDB : HMDB01178
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** [http://www.uniprot.org/uniprot/Q9ZCG5 Q9ZCG5]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O51244 O51244]
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** [http://www.genome.jp/dbget-bin/www_bget?C00301 C00301]
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** [http://www.uniprot.org/uniprot/O66647 O66647]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9PIB3 Q9PIB3]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57967 57967]
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** [http://www.uniprot.org/uniprot/Q58477 Q58477]
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* METABOLIGHTS : MTBLC57967
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** [http://www.uniprot.org/uniprot/O27194 O27194]
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{{#set: smiles=C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP([O-])(=O)OCC4(C(O)C(O)C(O4)O))(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/O84734 O84734]
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{{#set: common name=ADP-D-ribose}}
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** [http://www.uniprot.org/uniprot/Q9X199 Q9X199]
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{{#set: inchi key=InChIKey=SRNWOUGRCWSEMX-TYASJMOZSA-L}}
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** [http://www.uniprot.org/uniprot/P47251 P47251]
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{{#set: molecular weight=557.303    }}
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** [http://www.uniprot.org/uniprot/Q9JT77 Q9JT77]
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{{#set: common name=adenosine diphosphate D-ribose|adenosine 5'-(5-deoxy-D-ribofuranos-5-yl diphosphate)}}
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** [http://www.uniprot.org/uniprot/O83653 O83653]
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{{#set: consumed by=ARDP|RXN0-1441}}
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** [http://www.uniprot.org/uniprot/Q9Z736 Q9Z736]
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{{#set: produced by=3.2.1.143-RXN}}
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** [http://www.uniprot.org/uniprot/P49591 P49591]
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** [http://www.uniprot.org/uniprot/P56458 P56458]
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** [http://www.uniprot.org/uniprot/Q9ZJD9 Q9ZJD9]
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** [http://www.uniprot.org/uniprot/Q9CEX2 Q9CEX2]
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** [http://www.uniprot.org/uniprot/P43833 P43833]
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** [http://www.uniprot.org/uniprot/P26636 P26636]
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** [http://www.uniprot.org/uniprot/P39919 P39919]
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** [http://www.uniprot.org/uniprot/P37464 P37464]
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** [http://www.uniprot.org/uniprot/Q39230 Q39230]
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** [http://www.uniprot.org/uniprot/P75107 P75107]
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** [http://www.uniprot.org/uniprot/P73201 P73201]
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** [http://www.uniprot.org/uniprot/O82108 O82108]
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** [http://www.uniprot.org/uniprot/O82110 O82110]
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** [http://www.uniprot.org/uniprot/O81983 O81983]
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** [http://www.uniprot.org/uniprot/O45887 O45887]
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** [http://www.uniprot.org/uniprot/O14018 O14018]
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** [http://www.uniprot.org/uniprot/P54221 P54221]
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** [http://www.uniprot.org/uniprot/P07284 P07284]
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** [http://www.uniprot.org/uniprot/P0A8L1 P0A8L1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=structural_maintenance_of_chromosomes_protein_6}}
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{{#set: ec number=EC-6.1.1.11}}
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{{#set: gene associated=Tiso_gene_1684|Tiso_gene_10015|Tiso_gene_1682|Tiso_gene_587}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Metabolite ADENOSINE_DIPHOSPHATE_RIBOSE

  • smiles:
    • C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP([O-])(=O)OCC4(C(O)C(O)C(O4)O))(=O)[O-]
  • common name:
    • ADP-D-ribose
  • inchi key:
    • InChIKey=SRNWOUGRCWSEMX-TYASJMOZSA-L
  • molecular weight:
    • 557.303
  • Synonym(s):
    • adenosine diphosphate D-ribose
    • adenosine 5'-(5-deoxy-D-ribofuranos-5-yl diphosphate)

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 20762-30-5
  • BIGG : adprib
  • PUBCHEM:
  • HMDB : HMDB01178
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57967
"C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP([O-])(=O)OCC4(C(O)C(O)C(O4)O))(=O)[O-" cannot be used as a page name in this wiki.




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