Difference between revisions of "Tiso gene 17271"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUMARATE-REDUCTASE-NADH-RXN FUMARATE-REDUCTASE-NADH-RXN] == * direction: ** REVERSIBLE * common nam...")
(Created page with "Category:Gene == Gene Tiso_gene_17271 == * right end position: ** 3332 * transcription direction: ** POSITIVE * left end position: ** 2 * centisome position: ** 5.24796660...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUMARATE-REDUCTASE-NADH-RXN FUMARATE-REDUCTASE-NADH-RXN] ==
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== Gene Tiso_gene_17271 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 3332
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.3.1.6 EC-1.3.1.6]
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** 2
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* centisome position:
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** 5.247966600e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CDPKIN-RXN]]
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** 1 [[SUC]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[FUM]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 succinate[c] '''+''' 1 NAD+[c] '''<=>''' 1 fumarate[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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* Reaction: [[DADPKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[DCDPKIN-RXN]]
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* [[Tiso_gene_7285]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[DGDPKIN-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[DTDPKIN-RXN]]
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* [[Tiso_gene_16968]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[DUDPKIN-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[GDPKIN-RXN]]
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* [[Tiso_gene_16969]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[NUCLEOSIDE-DIP-KIN-RXN]]
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* [[Tiso_gene_19933]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-14120]]
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== Pathways ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* [[orthology]]:
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* Reaction: [[RXN-14228]]
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** [[pantograph]]:
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** Source: [[annotation-in-silico_annotation]]
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*** [[esiliculosus]]
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*** Assignment: ec-number
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* [[annotation]]:
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* Reaction: [[UDPKIN-RXN]]
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** [[pathwaytools]]:
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** Source: [[annotation-in-silico_annotation]]
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*** [[experimental_annotation]]
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*** Assignment: ec-number
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*** [[in-silico_annotation]]
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3332}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18281 18281]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00402 R00402]
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{{#set: centisome position=5.247966600e-2}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: ec number=EC-1.3.1.6}}
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{{#set: gene associated=Tiso_gene_7285|Tiso_gene_16968|Tiso_gene_16969|Tiso_gene_19933}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_17271

  • right end position:
    • 3332
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2
  • centisome position:
    • 5.247966600e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17271&oldid=46713"