Difference between revisions of "RETINYL-PALMITATE-ESTERASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_16360 == * left end position: ** 449 * transcription direction: ** NEGATIVE * right end position: ** 3144 * centisome position: ** 5.919578...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16360 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
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* left end position:
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* direction:
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** 449
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** retinyl-palmitate esterase
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* right end position:
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** ORF
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** 3144
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** serine_esterase
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* centisome position:
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** sialate_o-acetylesterase-like_protein
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** 5.919578   
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** lysophospholipase
 +
** alpha_beta_hydrolase
 +
** alpha_beta_hydrolase_fold_protein
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** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** retinyl palmitate hydrolase
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** retinyl palmitate hydrolyase
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** retinyl ester hydrolase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ARGININE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Retinols]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 a retinol[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRNA-CHARGING-PWY]]
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* Gene: [[Tiso_gene_4650]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10066]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4606]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1538]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11351]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_1922]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9429]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2556]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12686]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_16518]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1537]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17029]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=449}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
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{{#set: right end position=3144}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=5.919578    }}
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{{#set: common name=retinyl-palmitate esterase}}
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{{#set: reaction associated=ARGININE--TRNA-LIGASE-RXN}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: common name=serine_esterase}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
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{{#set: gene associated=Tiso_gene_4650|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_1922|Tiso_gene_9429|Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_16518|Tiso_gene_1537|Tiso_gene_17029}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction RETINYL-PALMITATE-ESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • retinyl-palmitate esterase
    • ORF
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • alpha_beta_hydrolase
    • alpha_beta_hydrolase_fold_protein
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):
    • retinyl palmitate hydrolase
    • retinyl palmitate hydrolyase
    • retinyl ester hydrolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinyl palmitate[c] + 1 H2O[c] => 1 palmitate[c] + 1 H+[c] + 1 a retinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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