Difference between revisions of "HYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROGEN-PEROXIDE HYDROGEN-PEROXIDE] == * smiles: ** OO * inchi key: ** InChIKey=MHAJPDPJQMAIIY...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** cytosolic_fe-s_cluster_assem...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROGEN-PEROXIDE HYDROGEN-PEROXIDE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] ==
−
* smiles:
+
* direction:
−
** OO
+
** REVERSIBLE
−
* inchi key:
+
−
** InChIKey=MHAJPDPJQMAIIY-UHFFFAOYSA-N
+
 
* common name:
 
* common name:
−
** hydrogen peroxide
+
** cytosolic_fe-s_cluster_assembly_factor_narfl
−
* molecular weight:
+
* ec number:
−
** 34.015   
+
** [http://enzyme.expasy.org/EC/1.12.7.2 EC-1.12.7.2]
 
* Synonym(s):
 
* Synonym(s):
−
** hydroperoxide
 
−
** perhydrol
 
−
** H2O2
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-17882]]
+
* With identifiers:
−
* [[CATAL-RXN]]
+
** 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[HYDROGEN-MOLECULE]][c] '''<=>''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c]
−
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
+
* With common name(s):
−
* [[RXN-17881]]
+
** 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2[c] '''<=>''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c]
−
* [[GLUTATHIONE-PEROXIDASE-RXN]]
+
 
−
* [[RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.]]
+
== Genes associated with this reaction  ==
−
* [[RXN-15288]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXN-12440]]
+
* Gene: [[Tiso_gene_4288]]
−
* [[RXN-3521]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-8635]]
+
*** Assignment: EC-NUMBER
−
* [[FATTY-ACID-PEROXIDASE-RXN]]
+
** Source: [[orthology-esiliculosus]]
−
* [[RXN-17883]]
+
== Pathways  ==
−
* [[RXN-17352]]
+
* [[PWY-6780]], hydrogen production VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780]
−
* [[GTHP]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[RXN-14240]]
+
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
−
* [[RXN-12540]]
+
** '''5''' reactions found over '''13''' reactions in the full pathway
−
* [[CHLORIDE-PEROXIDASE-RXN]]
+
* [[PWY-6785]], hydrogen production VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6785 PWY-6785]
−
* [[PEROXID-RXN]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
== Reaction(s) known to produce the compound ==
+
* [[PWY-6759]], hydrogen production III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6759 PWY-6759]
−
* [[RXN-11519]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PPPGO]]
+
* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY]
−
* [[PROTOPORGENOXI-RXN]]
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[1.1.3.41-RXN]]
+
== Reconstruction information  ==
−
* [[L-ASPARTATE-OXID-RXN]]
+
* Category: [[orthology]]
−
* [[1.1.3.37-RXN]]
+
** Source: [[orthology-esiliculosus]]
−
* [[RXN-11784]]
+
*** Tool: [[pantograph]]
−
* [[RXN-11026]]
+
* Category: [[annotation]]
−
* [[AMACETOXID-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-15684]]
+
*** Tool: [[pathwaytools]]
−
* [[RXN-6381]]
+
−
* [[RXN-14576]]
+
−
* [[RXN-12669]]
+
−
* [[1.8.3.5-RXN]]
+
−
* [[XANTHINE-OXIDASE-RXN]]
+
−
* [[RXN-10696]]
+
−
* [[RXN-14796]]
+
−
* [[ACYL-COA-OXIDASE-RXN]]
+
−
* [[PMPOXI-RXN]]
+
−
* [[AMINEOXID-RXN]]
+
−
* [[RXN-11521]]
+
−
* [[RXN-11520]]
+
−
* [[RXN-14775]]
+
−
* [[RXN-14771]]
+
−
* [[THIOL-OXIDASE-RXN]]
+
−
* [[RXN-5821]]
+
−
* [[PNPOXI-RXN]]
+
−
* [[RXN-17113]]
+
−
* [[RXN-16134]]
+
−
* [[RXN-10706]]
+
−
* [[RXN-10707]]
+
−
* [[RXN6666-4]]
+
−
* [[RXN-9597]]
+
−
* [[SUPEROX-DISMUT-RXN]]
+
−
* [[AMINEPHEN-RXN]]
+
−
* [[1.4.3.19-RXN]]
+
−
* [[R00357]]
+
−
* [[RXN-9600]]
+
−
* [[RXN-14789]]
+
−
* [[RXN-9926]]
+
−
* [[RXN-14785]]
+
−
* [[RXN-12518]]
+
−
== Reaction(s) of unknown directionality ==
+
 
== External links  ==
 
== External links  ==
−
* CAS : 7722-84-1
+
* LIGAND-RXN:
−
* METABOLIGHTS : MTBLC16240
+
** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
−
* PUBCHEM:
+
* UNIPROT:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=784 784]
+
** [http://www.uniprot.org/uniprot/P27648 P27648]
−
* HMDB : HMDB03125
+
** [http://www.uniprot.org/uniprot/P31892 P31892]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/O25350 O25350]
−
** [http://www.genome.jp/dbget-bin/www_bget?C00027 C00027]
+
** [http://www.uniprot.org/uniprot/O67092 O67092]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/P31891 P31891]
−
** [http://www.chemspider.com/Chemical-Structure.763.html 763]
+
** [http://www.uniprot.org/uniprot/P0AAJ8 P0AAJ8]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/O66894 O66894]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16240 16240]
+
** [http://www.uniprot.org/uniprot/P0AAM1 P0AAM1]
−
* BIGG : h2o2
+
** [http://www.uniprot.org/uniprot/P31898 P31898]
−
{{#set: smiles=OO}}
+
** [http://www.uniprot.org/uniprot/P0ACE0 P0ACE0]
−
{{#set: inchi key=InChIKey=MHAJPDPJQMAIIY-UHFFFAOYSA-N}}
+
** [http://www.uniprot.org/uniprot/O28891 O28891]
−
{{#set: common name=hydrogen peroxide}}
+
** [http://www.uniprot.org/uniprot/O66895 O66895]
−
{{#set: molecular weight=34.015    }}
+
** [http://www.uniprot.org/uniprot/Q9ZLK4 Q9ZLK4]
−
{{#set: common name=hydroperoxide|perhydrol|H2O2}}
+
** [http://www.uniprot.org/uniprot/Q9WY44 Q9WY44]
−
{{#set: consumed by=RXN-17882|CATAL-RXN|CYTOCHROME-C-PEROXIDASE-RXN|RXN-17881|GLUTATHIONE-PEROXIDASE-RXN|RXN-11820-STEARIC_ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.|RXN-15288|RXN-12440|RXN-3521|RXN-8635|FATTY-ACID-PEROXIDASE-RXN|RXN-17883|RXN-17352|GTHP|RXN-14240|RXN-12540|CHLORIDE-PEROXIDASE-RXN|PEROXID-RXN}}
+
** [http://www.uniprot.org/uniprot/Q46508 Q46508]
−
{{#set: produced by=RXN-11519|PPPGO|PROTOPORGENOXI-RXN|1.1.3.41-RXN|L-ASPARTATE-OXID-RXN|1.1.3.37-RXN|RXN-11784|RXN-11026|AMACETOXID-RXN|RXN-15684|RXN-6381|RXN-14576|RXN-12669|1.8.3.5-RXN|XANTHINE-OXIDASE-RXN|RXN-10696|RXN-14796|ACYL-COA-OXIDASE-RXN|PMPOXI-RXN|AMINEOXID-RXN|RXN-11521|RXN-11520|RXN-14775|RXN-14771|THIOL-OXIDASE-RXN|RXN-5821|PNPOXI-RXN|RXN-17113|RXN-16134|RXN-10706|RXN-10707|RXN6666-4|RXN-9597|SUPEROX-DISMUT-RXN|AMINEPHEN-RXN|1.4.3.19-RXN|R00357|RXN-9600|RXN-14789|RXN-9926|RXN-14785|RXN-12518}}
+
** [http://www.uniprot.org/uniprot/O66896 O66896]
 +
** [http://www.uniprot.org/uniprot/O67095 O67095]
 +
** [http://www.uniprot.org/uniprot/Q9PN32 Q9PN32]
 +
** [http://www.uniprot.org/uniprot/P13061 P13061]
 +
** [http://www.uniprot.org/uniprot/Q9UYN3 Q9UYN3]
 +
** [http://www.uniprot.org/uniprot/P16429 P16429]
 +
** [http://www.uniprot.org/uniprot/O52683 O52683]
 +
** [http://www.uniprot.org/uniprot/P13066 P13066]
 +
** [http://www.uniprot.org/uniprot/O25349 O25349]
 +
** [http://www.uniprot.org/uniprot/P0AAK1 P0AAK1]
 +
** [http://www.uniprot.org/uniprot/P29166 P29166]
 +
** [http://www.uniprot.org/uniprot/P07603 P07603]
 +
** [http://www.uniprot.org/uniprot/P13628 P13628]
 +
** [http://www.uniprot.org/uniprot/P0ACD8 P0ACD8]
 +
** [http://www.uniprot.org/uniprot/P69739 P69739]
 +
** [http://www.uniprot.org/uniprot/P12636 P12636]
 +
** [http://www.uniprot.org/uniprot/P12635 P12635]
 +
** [http://www.uniprot.org/uniprot/Q59262 Q59262]
 +
** [http://www.uniprot.org/uniprot/P33375 P33375]
 +
** [http://www.uniprot.org/uniprot/P33374 P33374]
 +
** [http://www.uniprot.org/uniprot/P21950 P21950]
 +
** [http://www.uniprot.org/uniprot/P21949 P21949]
 +
** [http://www.uniprot.org/uniprot/P23000 P23000]
 +
** [http://www.uniprot.org/uniprot/Q7M121 Q7M121]
 +
** [http://www.uniprot.org/uniprot/P15283 P15283]
 +
** [http://www.uniprot.org/uniprot/P15284 P15284]
 +
** [http://www.uniprot.org/uniprot/P16430 P16430]
 +
** [http://www.uniprot.org/uniprot/P16431 P16431]
 +
** [http://www.uniprot.org/uniprot/P16432 P16432]
 +
** [http://www.uniprot.org/uniprot/P16433 P16433]
 +
** [http://www.uniprot.org/uniprot/P17633 P17633]
 +
** [http://www.uniprot.org/uniprot/P17632 P17632]
 +
** [http://www.uniprot.org/uniprot/P18191 P18191]
 +
** [http://www.uniprot.org/uniprot/P18637 P18637]
 +
** [http://www.uniprot.org/uniprot/P18636 P18636]
 +
** [http://www.uniprot.org/uniprot/Q46606 Q46606]
 +
** [http://www.uniprot.org/uniprot/P31875 P31875]
 +
** [http://www.uniprot.org/uniprot/Q7M0Y1 Q7M0Y1]
 +
** [http://www.uniprot.org/uniprot/Q7M0Y0 Q7M0Y0]
 +
** [http://www.uniprot.org/uniprot/Q9S8S0 Q9S8S0]
 +
** [http://www.uniprot.org/uniprot/P31883 P31883]
 +
** [http://www.uniprot.org/uniprot/P21960 P21960]
 +
** [http://www.uniprot.org/uniprot/Q43953 Q43953]
 +
** [http://www.uniprot.org/uniprot/O96948 O96948]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=cytosolic_fe-s_cluster_assembly_factor_narfl}}
 +
{{#set: ec number=EC-1.12.7.2}}
 +
{{#set: gene associated=Tiso_gene_4288}}
 +
{{#set: in pathway=PWY-6780|PWY4LZ-257|PWY-6785|PWY-6759|GLUDEG-II-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction HYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • cytosolic_fe-s_cluster_assembly_factor_narfl
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6780, hydrogen production VI: PWY-6780
    • 1 reactions found over 2 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-6785, hydrogen production VIII: PWY-6785
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6759, hydrogen production III: PWY-6759
    • 1 reactions found over 1 reactions in the full pathway
  • GLUDEG-II-PWY, L-glutamate degradation VII (to butanoate): GLUDEG-II-PWY
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HYDROG-RXN&oldid=46842"