Difference between revisions of "Tiso gene 8614"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOADIPATE-ENOL-LACTONASE-RXN 3-OXOADIPATE-ENOL-LACTONASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
(Created page with "Category:Gene == Gene Tiso_gene_8614 == * right end position: ** 9665 * transcription direction: ** POSITIVE * left end position: ** 7900 * centisome position: ** 78.41970...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOADIPATE-ENOL-LACTONASE-RXN 3-OXOADIPATE-ENOL-LACTONASE-RXN] ==
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== Gene Tiso_gene_8614 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9665
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* common name:
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* transcription direction:
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** alpha_beta_hydrolase_fold_protein
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.1.24 EC-3.1.1.24]
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** 7900
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* centisome position:
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** 78.41970   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIMETHUROPORDEHYDROG-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[3-OXOADIPATE-ENOL-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-KETO-ADIPATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 (4,5-dihydro-5-oxofuran-2-yl)-acetate[c] '''=>''' 1 H+[c] '''+''' 1 3-oxoadipate[c]
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* Reaction: [[RXN-13403]]
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_10066]]
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** Source: [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-8675]]
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***EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* Reaction: [[UROPORIIIMETHYLTRANSA-RXN]]
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* [[PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]], protocatechuate degradation II (ortho-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]
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** Source: [[orthology-esiliculosus]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Pathways associated ==
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* [[CATECHOL-ORTHO-CLEAVAGE-PWY]], catechol degradation to β-ketoadipate: [http://metacyc.org/META/NEW-IMAGE?object=CATECHOL-ORTHO-CLEAVAGE-PWY CATECHOL-ORTHO-CLEAVAGE-PWY]
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* [[PWY-7376]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7377]]
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== Reconstruction information  ==
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* [[PWY-5194]]
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* [[annotation]]:
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* [[PWY-5196]]
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9665}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10184 10184]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7900}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02991 R02991]
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{{#set: centisome position=78.41970    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=DIMETHUROPORDEHYDROG-RXN|RXN-13403|RXN-8675|UROPORIIIMETHYLTRANSA-RXN}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: pathway associated=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
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{{#set: ec number=EC-3.1.1.24}}
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{{#set: gene associated=Tiso_gene_10066}}
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{{#set: in pathway=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY|CATECHOL-ORTHO-CLEAVAGE-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:15, 21 March 2018

Gene Tiso_gene_8614

  • right end position:
    • 9665
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7900
  • centisome position:
    • 78.41970
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8614&oldid=47226"