Difference between revisions of "RXN-11569"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPID-IVA KDO-LIPID-IVA] == * smiles: ** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11569 RXN-11569] == * direction: ** LEFT-TO-RIGHT * common name: ** iduronate-2-sulfatase * ec...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPID-IVA KDO-LIPID-IVA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11569 RXN-11569] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))OP([O-])([O-])=O))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=GPNCBCJEDRRCDW-XFULRARUSA-I
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* common name:
 
* common name:
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** α-Kdo-(2→6)-lipid IVA
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** iduronate-2-sulfatase
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* molecular weight:
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* ec number:
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** 1620.861   
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** [http://enzyme.expasy.org/EC/3.1.6.13 EC-3.1.6.13]
 
* Synonym(s):
 
* Synonym(s):
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** 3-Deoxy-D-manno-octulosonyl-lipid IV(A)
 
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** 3-deoxy-α-D-manno-oct-2-ulopyranosyl-(2->6)-2-deoxy-2-{[(3R)-3-hydroxypentadecanoyl]amino}-3-O-[(3R)-3-hydroxytetradecanoyl]-4-O-phosphono-β-D-glucopyranosyl-(1->6)-2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-α-D-glucopyranose
 
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** (KDO)-lipid IVA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[KDOTRANS2-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[Dermatan-sulfate-L-IdoA2S]][c] '''=>''' 1 [[SULFATE]][c] '''+''' 1 [[DERMATAN-L-IDURONATE]][c] '''+''' 2 [[PROTON]][c]
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* [[KDOTRANS-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 [dermatan-sulfate]-2-O-sulfo-α-L-iduronate[c] '''=>''' 1 sulfate[c] '''+''' 1 [dermatan]-α-L-iduronate[c] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18595]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820572 91820572]
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{{#set: common name=iduronate-2-sulfatase}}
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* CHEBI:
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{{#set: ec number=EC-3.1.6.13}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60364 60364]
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{{#set: gene associated=Tiso_gene_18595}}
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* BIGG : kdolipid4
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{{#set: in pathway=}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06024 C06024]
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: smiles=CCCCCCCCCCCC(O)CC(=O)NC1(C(OP([O-])([O-])=O)OC(C(O)C(OC(CC(O)CCCCCCCCCCC)=O)1)COC2(C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(C(O2)COC3(C([O-])=O)(O[CH](C(CO)O)C(O)C(O)C3))OP([O-])([O-])=O))}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=GPNCBCJEDRRCDW-XFULRARUSA-I}}
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{{#set: common name=α-Kdo-(2→6)-lipid IVA}}
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{{#set: molecular weight=1620.861    }}
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{{#set: common name=3-Deoxy-D-manno-octulosonyl-lipid IV(A)|3-deoxy-α-D-manno-oct-2-ulopyranosyl-(2->6)-2-deoxy-2-{[(3R)-3-hydroxypentadecanoyl]amino}-3-O-[(3R)-3-hydroxytetradecanoyl]-4-O-phosphono-β-D-glucopyranosyl-(1->6)-2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-α-D-glucopyranose|(KDO)-lipid IVA}}
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{{#set: consumed by=KDOTRANS2-RXN}}
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{{#set: produced by=KDOTRANS-RXN}}
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Latest revision as of 20:16, 21 March 2018

Reaction RXN-11569

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • iduronate-2-sulfatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11569&oldid=47325"