Difference between revisions of "R311-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semialdehyde...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R311-RXN R311-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Acrylamidase ** amidase * ec...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R311-RXN R311-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** methylmalonate-semialdehyde_dehydrogenase
+
** Acrylamidase
 +
** amidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
+
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[HCO3]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[ACRYLAMIDE]][c] '''=>''' 1 [[ACRYLATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 hydrogencarbonate[c]
+
** 1 H2O[c] '''+''' 1 acrylamide[c] '''=>''' 1 acrylate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11323]]
+
* Gene: [[Tiso_gene_13682]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
+
* [[PWY-7308]], acrylonitrile degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7308 PWY-7308]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34367 34367]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05551 R05551]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
+
{{#set: common name=Acrylamidase}}
−
{{#set: ec number=EC-1.2.1.27}}
+
{{#set: common name=amidase}}
−
{{#set: gene associated=Tiso_gene_11323}}
+
{{#set: ec number=EC-3.5.1.4}}
−
{{#set: in pathway=VALDEG-PWY}}
+
{{#set: gene associated=Tiso_gene_13682}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7308}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:16, 21 March 2018

Reaction R311-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acrylamidase
    • amidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 acrylamide[c] => 1 acrylate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7308, acrylonitrile degradation I: PWY-7308
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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