Difference between revisions of "MALIC-NADP-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5073 RXN0-5073] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5073 RXN0-5073] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ITP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[IDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[NADP]][c] '''+''' 1 [[MAL]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ITP[c] '''+''' 1 H2O[c] '''=>''' 1 IDP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
+
** 1 NADP+[c] '''+''' 1 (S)-malate[c] '''=>''' 1 pyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12899]]
+
* Gene: [[Tiso_gene_12200]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-synechocystis]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6675]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_12896]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
** Source: [[orthology-synechocystis]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28330 28330]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00719 R00719]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P12628 P12628]
 +
** [http://www.uniprot.org/uniprot/P06801 P06801]
 +
** [http://www.uniprot.org/uniprot/P13697 P13697]
 +
** [http://www.uniprot.org/uniprot/P16243 P16243]
 +
** [http://www.uniprot.org/uniprot/O48656 O48656]
 +
** [http://www.uniprot.org/uniprot/P22178 P22178]
 +
** [http://www.uniprot.org/uniprot/P93139 P93139]
 +
** [http://www.uniprot.org/uniprot/P34105 P34105]
 +
** [http://www.uniprot.org/uniprot/P28227 P28227]
 +
** [http://www.uniprot.org/uniprot/P36444 P36444]
 +
** [http://www.uniprot.org/uniprot/P40927 P40927]
 +
** [http://www.uniprot.org/uniprot/P37223 P37223]
 +
** [http://www.uniprot.org/uniprot/P48163 P48163]
 +
** [http://www.uniprot.org/uniprot/Q16798 Q16798]
 +
** [http://www.uniprot.org/uniprot/O50015 O50015]
 +
** [http://www.uniprot.org/uniprot/O04935 O04935]
 +
** [http://www.uniprot.org/uniprot/O04936 O04936]
 +
** [http://www.uniprot.org/uniprot/P37222 P37222]
 +
** [http://www.uniprot.org/uniprot/Q42888 Q42888]
 +
** [http://www.uniprot.org/uniprot/Q42889 Q42889]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.6.1}}
+
{{#set: ec number=EC-1.1.1.40}}
−
{{#set: gene associated=Tiso_gene_12899}}
+
{{#set: gene associated=Tiso_gene_12200|Tiso_gene_6675|Tiso_gene_12896}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-241|GLUCONEO-PWY|PWY-7117}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
 

Latest revision as of 20:17, 21 March 2018

Reaction MALIC-NADP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 (S)-malate[c] => 1 pyruvate[c] + 1 CO2[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 2 reactions found over 5 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MALIC-NADP-RXN&oldid=47532"