Difference between revisions of "RXN0-5180"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12303 RXN-12303] == * direction: ** REVERSIBLE * common name: ** NAD(P)H dehydrogenase (plastoq...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.5...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12303 RXN-12303] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** NAD(P)H dehydrogenase (plastoquinone)
 
−
** possible_vitamin_k_epoxide_plastid_protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.6.5.2 EC-1.6.5.2]
+
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[Plastoquinols]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''<=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD(P)H[c] '''+''' 1 a plastoquinone[c] '''+''' 1 H+[c] '''<=>''' 1 a plastoquinol[c] '''+''' 1 NAD(P)+[c]
+
** 1 isopentenyl diphosphate[c] '''+''' 1 (2E,6E)-farnesyl diphosphate[c] '''<=>''' 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10318]]
+
* Gene: [[Tiso_gene_2848]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8531]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18201]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_10317]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11582]]
 +
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7731]], superpathway of photosynthetic hydrogen production: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7731 PWY-7731]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=NAD(P)H dehydrogenase (plastoquinone)}}
+
{{#set: ec number=EC-2.5.1}}
−
{{#set: common name=possible_vitamin_k_epoxide_plastid_protein}}
+
{{#set: gene associated=Tiso_gene_2848|Tiso_gene_8531|Tiso_gene_18201|Tiso_gene_10317|Tiso_gene_11582}}
−
{{#set: ec number=EC-1.6.5.2}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_10318}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY-7731}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:17, 21 March 2018

Reaction RXN0-5180

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 isopentenyl diphosphate[c] + 1 (2E,6E)-farnesyl diphosphate[c] <=> 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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