Difference between revisions of "Tiso gene 8636"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CELLULOSE-SYNTHASE-UDP-FORMING-RXN CELLULOSE-SYNTHASE-UDP-FORMING-RXN] == * direction: ** LEFT-TO-R...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8636 == * right end position: ** 10042 * transcription direction: ** POSITIVE * left end position: ** 4847 * centisome position: ** 48.2576...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CELLULOSE-SYNTHASE-UDP-FORMING-RXN CELLULOSE-SYNTHASE-UDP-FORMING-RXN] ==
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== Gene Tiso_gene_8636 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10042
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* common name:
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* transcription direction:
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** glycosyltransferase_family_2_protein
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.12 EC-2.4.1.12]
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** 4847
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* centisome position:
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** 48.257668   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[CPD-12575]][c] '''+''' 1 [[CELLULOSE]][c] '''=>''' 1 [[CELLULOSE]][c] '''+''' 1 [[UDP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 UDP-α-D-glucose[c] '''+''' 1 cellulose[c] '''=>''' 1 cellulose[c] '''+''' 1 UDP[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_6390]]
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* [[PWY-7511]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_322]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-1001]], cellulose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1001 PWY-1001]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=10042}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02889 R02889]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=4847}}
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** [http://www.uniprot.org/uniprot/Q59167 Q59167]
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{{#set: centisome position=48.257668    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: common name=glycosyltransferase_family_2_protein}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: ec number=EC-2.4.1.12}}
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{{#set: gene associated=Tiso_gene_6390|Tiso_gene_322}}
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{{#set: in pathway=PWY-1001}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:21, 21 March 2018

Gene Tiso_gene_8636

  • right end position:
    • 10042
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4847
  • centisome position:
    • 48.257668
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8636&oldid=41043"