Difference between revisions of "GMP-SYN-GLUT-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_17130 == * left end position: ** 62 * transcription direction: ** POSITIVE * right end position: ** 1650 * centisome position: ** 1.5909674...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_ami...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17130 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] ==
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* left end position:
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* direction:
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** 62
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** glutamine_amidotransferase
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* right end position:
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* ec number:
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** 1650
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** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2]
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* centisome position:
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** 1.5909674   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-6883]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 2 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 AMP[c] '''+''' 1 GMP[c] '''+''' 2 H+[c]
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== Pathways associated ==
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* [[PWY-4302]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6657]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=62}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11680 11680]
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{{#set: right end position=1650}}
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* LIGAND-RXN:
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{{#set: centisome position=1.5909674    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
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{{#set: reaction associated=RXN-6883}}
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* UNIPROT:
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{{#set: pathway associated=PWY-4302}}
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** [http://www.uniprot.org/uniprot/P32073 P32073]
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** [http://www.uniprot.org/uniprot/P49915 P49915]
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** [http://www.uniprot.org/uniprot/O25165 O25165]
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** [http://www.uniprot.org/uniprot/Q58531 Q58531]
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** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
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** [http://www.uniprot.org/uniprot/P29727 P29727]
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** [http://www.uniprot.org/uniprot/O66601 O66601]
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** [http://www.uniprot.org/uniprot/P49056 P49056]
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** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
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** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
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** [http://www.uniprot.org/uniprot/P44335 P44335]
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** [http://www.uniprot.org/uniprot/P38625 P38625]
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** [http://www.uniprot.org/uniprot/P49057 P49057]
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** [http://www.uniprot.org/uniprot/P04079 P04079]
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** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamine_amidotransferase}}
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{{#set: ec number=EC-6.3.5.2}}
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{{#set: gene associated=Tiso_gene_6657}}
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{{#set: in pathway=PWY-7221}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:18, 21 March 2018

Reaction GMP-SYN-GLUT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamine_amidotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 ATP[c] + 1 H2O[c] + 1 XMP[c] => 1 diphosphate[c] + 1 L-glutamate[c] + 1 AMP[c] + 1 GMP[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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