Difference between revisions of "RXN-13039"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13039 RXN-13039] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13039 RXN-13039] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.2.1.44 EC-1.2.1.44]
+
** lipoate-protein_ligase_a
 +
** lipoate-protein_ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FERULOYL-COA]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CONIFERYL-ALDEHYDE]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[LIPOYL-AMP]][c] '''+''' 1 [[Gcv-H]][c] '''=>''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 feruloyl-CoA[c] '''=>''' 1 NADP+[c] '''+''' 1 coniferaldehyde[c] '''+''' 1 coenzyme A[c]
+
** 1 lipoyl-adenylate[c] '''+''' 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''+''' 2 H+[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9504]]
+
* Gene: [[Tiso_gene_17215]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_11016]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_8713]]
−
* [[Tiso_gene_15272]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4494]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17216]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4493]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6027]], capsiconiate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6027 PWY-6027]
+
* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
+
−
** '''7''' reactions found over '''15''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02193 R02193]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.2.1.44}}
+
{{#set: common name=lipoate-protein_ligase_a}}
−
{{#set: gene associated=Tiso_gene_9504|Tiso_gene_11016|Tiso_gene_15272}}
+
{{#set: common name=lipoate-protein_ligase}}
−
{{#set: in pathway=PWY-6027|PWY-361}}
+
{{#set: gene associated=Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_4494|Tiso_gene_17216|Tiso_gene_4493}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-6984}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:18, 21 March 2018

Reaction RXN-13039

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 lipoyl-adenylate[c] + 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] => 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] + 2 H+[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13039&oldid=47645"