Difference between revisions of "LYSDECARBOX-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.6.4.9-RXN 3.6.4.9-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * W...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.1.1.18 EC-4.1.1.18] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 | + | ** 1 [[LYS]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CADAVERINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 cadaverine[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[Tiso_gene_10395]] |
− | ** [[ | + | ** Source: [[orthology-synechocystis]] |
== Pathways == | == Pathways == | ||
+ | * [[PWY0-461]], L-lysine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-461 PWY0-461] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5468]], lupanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5468 PWY-5468] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6381]], bisucaberin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6381 PWY-6381] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6328]], L-lysine degradation X: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6328 PWY-6328] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6375]], desferrioxamine E biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6375 PWY-6375] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6376]], desferrioxamine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6376 PWY-6376] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]] | + | * Category: [[orthology]] |
− | ** [[ | + | ** Source: [[orthology-synechocystis]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22352 22352] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00462 R00462] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P05033 P05033] | ||
+ | ** [http://www.uniprot.org/uniprot/P21885 P21885] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9H3 P0A9H3] | ||
+ | ** [http://www.uniprot.org/uniprot/P52095 P52095] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: gene associated= | + | {{#set: ec number=EC-4.1.1.18}} |
− | {{#set: in pathway=}} | + | {{#set: gene associated=Tiso_gene_10395}} |
+ | {{#set: in pathway=PWY0-461|PWY-5468|PWY-6381|PWY0-1303|PWY-6328|PWY-6375|PWY-6376}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction source=orthology-synechocystis}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
− |
Latest revision as of 20:18, 21 March 2018
Contents
Reaction LYSDECARBOX-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 LYS[c] + 1 PROTON[c] => 1 CADAVERINE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 L-lysine[c] + 1 H+[c] => 1 cadaverine[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_10395
- Source: orthology-synechocystis
Pathways
- PWY0-461, L-lysine degradation I: PWY0-461
- 1 reactions found over 1 reactions in the full pathway
- PWY-5468, lupanine biosynthesis: PWY-5468
- 1 reactions found over 5 reactions in the full pathway
- PWY-6381, bisucaberin biosynthesis: PWY-6381
- 1 reactions found over 5 reactions in the full pathway
- PWY0-1303, aminopropylcadaverine biosynthesis: PWY0-1303
- 2 reactions found over 2 reactions in the full pathway
- PWY-6328, L-lysine degradation X: PWY-6328
- 1 reactions found over 6 reactions in the full pathway
- PWY-6375, desferrioxamine E biosynthesis: PWY-6375
- 1 reactions found over 5 reactions in the full pathway
- PWY-6376, desferrioxamine B biosynthesis: PWY-6376
- 1 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-synechocystis
External links