Difference between revisions of "Tiso gene 10015"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Gene == Gene Tiso_gene_10015 == * right end position: ** 6470 * transcription direction: ** NEGATIVE * left end position: ** 5829 * centisome position: ** 65.4502...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN] ==
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== Gene Tiso_gene_10015 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6470
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* common name:
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* transcription direction:
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** diacylglycerol_acyltransferase
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** NEGATIVE
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** at5g53050_protein
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* left end position:
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* ec number:
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** 5829
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** [http://enzyme.expasy.org/EC/2.3.1.20 EC-2.3.1.20]
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* centisome position:
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** 65.45026   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11696]]
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** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ACYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[Triacylglycerols]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 an acyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a triacyl-sn-glycerol[c]
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* Reaction: [[RXN0-2161]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[SERINE--TRNA-LIGASE-RXN]]
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* [[Tiso_gene_8889]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_20057]]
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* Reaction: [[VINYLACETYL-COA-DELTA-ISOMERASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_8006]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[TRNA-CHARGING-PWY]]
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* [[Tiso_gene_3902]]
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* [[PWY0-901]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6281]]
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* [[Tiso_gene_20058]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8007]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11824]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRIGLSYN-PWY TRIGLSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6470}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10868 10868]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5829}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02251 R02251]
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{{#set: centisome position=65.45026    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-11696|RXN0-2161|SERINE--TRNA-LIGASE-RXN|VINYLACETYL-COA-DELTA-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9SLD2 Q9SLD2]
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{{#set: pathway associated=TRNA-CHARGING-PWY|PWY0-901|PWY-6281}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=diacylglycerol_acyltransferase}}
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{{#set: common name=at5g53050_protein}}
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{{#set: ec number=EC-2.3.1.20}}
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{{#set: gene associated=Tiso_gene_8889|Tiso_gene_20057|Tiso_gene_8006|Tiso_gene_3902|Tiso_gene_20058|Tiso_gene_8007|Tiso_gene_11824}}
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{{#set: in pathway=TRIGLSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_10015

  • right end position:
    • 6470
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5829
  • centisome position:
    • 65.45026
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10015&oldid=47744"