Difference between revisions of "RXN-8038"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.5.1...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** acetyl-_c-acetyltransferase
+
−
** 3-ketoacyl-_thiolase
+
−
** thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/5.5.1 EC-5.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11524]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-11525]][c]
+
** 1 [[NEUROSPORENE]][c] '''<=>''' 1 [[CPD-7419]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 OPC6-3-ketoacyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 OPC4-CoA[c]
+
** 1 all-trans neurosporene[c] '''<=>''' 1 &beta;-zeacarotene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3856]]
+
* Gene: [[Tiso_gene_8263]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_15327]]
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* Gene: [[Tiso_gene_3577]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_6282]]
−
* [[Tiso_gene_3855]]
+
** Source: [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_11980]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_4457]]
−
* [[Tiso_gene_10116]]
+
** Source: [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_1547]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 
−
** '''15''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04801 R04801]
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=thiolase}}
+
{{#set: ec number=EC-5.5.1}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: gene associated=Tiso_gene_8263|Tiso_gene_3577|Tiso_gene_6282|Tiso_gene_11980|Tiso_gene_4457|Tiso_gene_1547}}
−
{{#set: gene associated=Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_17451}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-735}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:20, 21 March 2018

Reaction RXN-8038

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans neurosporene[c] <=> 1 β-zeacarotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8038&oldid=47982"