Difference between revisions of "AMP-DEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** amp_deamina...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** amp_deaminase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
+
** [http://enzyme.expasy.org/EC/3.5.4.17 EC-3.5.4.17]
 +
** [http://enzyme.expasy.org/EC/3.5.4.6 EC-3.5.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[IMP]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c]
+
** 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 IMP[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11297]]
+
* Gene: [[Tiso_gene_1778]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
* Category: [[annotation]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
* [[manual]]:
+
−
** [[primary_network]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14777 14777]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
+
** [http://www.uniprot.org/uniprot/P10759 P10759]
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
+
** [http://www.uniprot.org/uniprot/Q02356 Q02356]
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
+
** [http://www.uniprot.org/uniprot/P23109 P23109]
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
+
** [http://www.uniprot.org/uniprot/P15274 P15274]
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
+
** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8]
−
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
+
** [http://www.uniprot.org/uniprot/Q01433 Q01433]
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
+
** [http://www.uniprot.org/uniprot/Q01432 Q01432]
−
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
+
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
+
−
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
+
−
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
+
−
** [http://www.uniprot.org/uniprot/O27344 O27344]
+
−
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
+
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
+
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
+
−
** [http://www.uniprot.org/uniprot/P26722 P26722]
+
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
+
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
+
−
** [http://www.uniprot.org/uniprot/P50935 P50935]
+
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
+
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
+
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
+
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
+
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
+
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.6.1.31}}
+
{{#set: common name=amp_deaminase}}
−
{{#set: gene associated=Tiso_gene_11297}}
+
{{#set: ec number=EC-3.5.4.17}}
−
{{#set: in pathway=HISTSYN-PWY}}
+
{{#set: ec number=EC-3.5.4.6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_1778}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-6596}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:21, 21 March 2018

Reaction AMP-DEAMINASE-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 AMP[c] + 1 H2O[c] => 1 IMP[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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