Difference between revisions of "Tiso gene 18743"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_18743 == * right end position: ** 2567 * transcription direction: ** NEGATIVE * left end position: ** 423 * centisome position: ** 14.99468...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] ==
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== Gene Tiso_gene_18743 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2567
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** NEGATIVE
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* left end position:
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** 423
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* centisome position:
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** 14.994682   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-10642]]
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** 1 [[CPD-11526]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-11527]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 OPC4-trans-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 OPC4-3-hydroxyacyl-CoA[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[UROGENDECARBOX-RXN]]
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* [[Tiso_gene_16145]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_6885]]
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_14262]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[HEMESYN2-PWY]]
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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* [[PWY0-1415]]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7159]]
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== Reconstruction information  ==
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* [[PWY-5531]]
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* [[orthology]]:
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* [[CHLOROPHYLL-SYN]]
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** [[pantograph]]:
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* [[PWY-7766]]
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*** [[esiliculosus]]
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* [[HEME-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2567}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Tiso_gene_16145|Tiso_gene_6885|Tiso_gene_14262}}
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{{#set: left end position=423}}
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{{#set: in pathway=PWY-735}}
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{{#set: centisome position=14.994682    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=RXN-10642|UROGENDECARBOX-RXN}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: pathway associated=HEMESYN2-PWY|PWY0-1415|PWY-7159|PWY-5531|CHLOROPHYLL-SYN|PWY-7766|HEME-BIOSYNTHESIS-II}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_18743

  • right end position:
    • 2567
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 423
  • centisome position:
    • 14.994682
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18743&oldid=48081"