Difference between revisions of "RXN-1143"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** geranylgeranyl_diphosphate_reductase
+
** caffeate_o-methyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-7003]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
+
** 1 [[5-HYDROXY-CONIFERALDEHYDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPALDEHYDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 phytyl diphosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c]
+
** 1 5-hydroxy-coniferaldehyde[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2613]]
+
* Gene: [[Tiso_gene_18257]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_18971]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
+
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06576 R06576]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
+
{{#set: common name=caffeate_o-methyltransferase}}
−
{{#set: gene associated=Tiso_gene_2613}}
+
{{#set: ec number=EC-2.1.1.68}}
−
{{#set: in pathway=PWY-5063}}
+
{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-361|PWY-5168}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:21, 21 March 2018

Reaction RXN-1143

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • caffeate_o-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-5168, ferulate and sinapate biosynthesis: PWY-5168
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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