Difference between revisions of "RXN66-480"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7850 CPD-7850] == * smiles: ** CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC(C=1C)=O)(C)C))C)C)C=CC=C(C)C=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-480 RXN66-480] == * direction: ** LEFT-TO-RIGHT * common name: ** phytenoyl-CoA synthetase **...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7850 CPD-7850] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-480 RXN66-480] ==
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* smiles:
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* direction:
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** CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC(C=1C)=O)(C)C))C)C)C=CC=C(C)C=CC2(=C(CCCC2(C)C)C)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=QXNWZXMBUKUYMD-QQGJMDNJSA-N
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* common name:
 
* common name:
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** echinenone
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** phytenoyl-CoA synthetase
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* molecular weight:
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** polyketide_synthase
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** 550.866   
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** long_chain_acyl-_synthetase
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** ORF
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** acyl-_synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[R07562]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-14927]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-14928]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 phytenate[c] '''=>''' 1 diphosphate[c] '''+''' 1 phytenoyl-CoA[c] '''+''' 1 AMP[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_348]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4191]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
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** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPR01070060
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=phytenoyl-CoA synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5281236 5281236]
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{{#set: common name=polyketide_synthase}}
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* CHEMSPIDER:
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{{#set: common name=long_chain_acyl-_synthetase}}
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** [http://www.chemspider.com/Chemical-Structure.4444648.html 4444648]
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{{#set: common name=ORF}}
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* CHEBI:
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{{#set: common name=acyl-_synthetase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=4746 4746]
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{{#set: ec number=EC-6.2.1.3}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_348|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_136|Tiso_gene_500|Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_9394}}
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** [http://www.genome.jp/dbget-bin/www_bget?C08592 C08592]
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{{#set: in pathway=PWY66-389}}
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{{#set: smiles=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC(C=1C)=O)(C)C))C)C)C=CC=C(C)C=CC2(=C(CCCC2(C)C)C)}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: inchi key=InChIKey=QXNWZXMBUKUYMD-QQGJMDNJSA-N}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: common name=echinenone}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: molecular weight=550.866    }}
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−
{{#set: consumed by=R07562}}
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Latest revision as of 20:22, 21 March 2018

Reaction RXN66-480

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytenoyl-CoA synthetase
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • ORF
    • acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 phytenate[c] => 1 diphosphate[c] + 1 phytenoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-389, phytol degradation: PWY66-389
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-480&oldid=48212"