Difference between revisions of "CPD-464"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9650 RXN-9650] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-464 CPD-464] == * smiles: ** CC(=CCCC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(CCC=C(C)C)C)C)(C1COP(O...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9650 RXN-9650] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-464 CPD-464] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(CCC=C(C)C)C)C)(C1COP(OP(=O)([O-])[O-])([O-])=O)C))C)C)C)C
 
* common name:
 
* common name:
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** polyketide_synthase
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** prephytoene diphosphate
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** 3-oxoacyl-synthase
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* inchi key:
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* ec number:
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** InChIKey=RVCNKTPCHZNAAO-IMSLGMFESA-K
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 719.897   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** (1R,2R,3R)-prephytoene diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXNARA-8002]]
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN-12245]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 malonyl-CoA[c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
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* [[2.5.1.32-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=polyketide_synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245670 25245670]
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{{#set: common name=3-oxoacyl-synthase}}
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* HMDB : HMDB03023
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{{#set: ec number=EC-2.3.1.86}}
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* CHEBI:
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{{#set: ec number=EC-2.3.1.85}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58011 58011]
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{{#set: ec number=EC-2.3.1.41}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_5939|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_14485|Tiso_gene_500}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03427 C03427]
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{{#set: in pathway=PWY-5994}}
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{{#set: smiles=CC(=CCCC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(CCC=C(C)C)C)C)(C1COP(OP(=O)([O-])[O-])([O-])=O)C))C)C)C)C}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=prephytoene diphosphate}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=RVCNKTPCHZNAAO-IMSLGMFESA-K}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: molecular weight=719.897    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=(1R,2R,3R)-prephytoene diphosphate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=RXNARA-8002|RXN-12245}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: produced by=2.5.1.32-RXN}}

Latest revision as of 20:23, 21 March 2018

Metabolite CPD-464

  • smiles:
    • CC(=CCCC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(CCC=C(C)C)C)C)(C1COP(OP(=O)([O-])[O-])([O-])=O)C))C)C)C)C
  • common name:
    • prephytoene diphosphate
  • inchi key:
    • InChIKey=RVCNKTPCHZNAAO-IMSLGMFESA-K
  • molecular weight:
    • 719.897
  • Synonym(s):
    • (1R,2R,3R)-prephytoene diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(=CCCC(=CCCC(=CCCC(=CC1(C(CCC=C(CCC=C(CCC=C(C)C)C)C)(C1COP(OP(=O)([O-])[O-])([O-])=O)C))C)C)C)C" cannot be used as a page name in this wiki.




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