Difference between revisions of "MALONATE-S-ALD"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphomethylpyrimi...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MALONATE-S-ALD MALONATE-S-ALD] == * smiles: ** [CH](=O)CC([O-])=O * common name: ** 3-oxopropan...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MALONATE-S-ALD MALONATE-S-ALD] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** [CH](=O)CC([O-])=O
 
* common name:
 
* common name:
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** phosphomethylpyrimidine_kinase
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** 3-oxopropanoate
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** thiamine_monophosphate_synthase
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* inchi key:
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* ec number:
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** InChIKey=OAKURXIZZOAYBC-UHFFFAOYSA-M
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** [http://enzyme.expasy.org/EC/2.7.4.7 EC-2.7.4.7]
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* molecular weight:
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** 87.055   
 
* Synonym(s):
 
* Synonym(s):
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** malonate semialdehyde
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** malonic semialdehyde
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-2902]]
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** 1 [[ATP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''=>''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine[c] '''=>''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17192]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_16224]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2160]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2159]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 926-61-4
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19893 19893]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=9543142 9543142]
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** [http://www.genome.jp/dbget-bin/www_bget?R04509 R04509]
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* HMDB : HMDB11111
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JTE1 Q9JTE1]
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** [http://www.genome.jp/dbget-bin/www_bget?C00222 C00222]
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** [http://www.uniprot.org/uniprot/Q9PNL2 Q9PNL2]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9CI79 Q9CI79]
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** [http://www.chemspider.com/Chemical-Structure.7822115.html 7822115]
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** [http://www.uniprot.org/uniprot/Q9CG47 Q9CG47]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=33190 33190]
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{{#set: common name=phosphomethylpyrimidine_kinase}}
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* METABOLIGHTS : MTBLC33190
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{{#set: common name=thiamine_monophosphate_synthase}}
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{{#set: smiles=[CH](=O)CC([O-])=O}}
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{{#set: ec number=EC-2.7.4.7}}
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{{#set: common name=3-oxopropanoate}}
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{{#set: gene associated=Tiso_gene_17192|Tiso_gene_16224|Tiso_gene_2160|Tiso_gene_2159}}
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{{#set: inchi key=InChIKey=OAKURXIZZOAYBC-UHFFFAOYSA-M}}
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{{#set: in pathway=PWY-6910|PWY-7282|PWY-6890|PWY-7356|PWY-7357}}
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{{#set: molecular weight=87.055    }}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=malonate semialdehyde|malonic semialdehyde}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: consumed by=RXN-2902}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:23, 21 March 2018

Metabolite MALONATE-S-ALD

  • smiles:
    • [CH](=O)CC([O-])=O
  • common name:
    • 3-oxopropanoate
  • inchi key:
    • InChIKey=OAKURXIZZOAYBC-UHFFFAOYSA-M
  • molecular weight:
    • 87.055
  • Synonym(s):
    • malonate semialdehyde
    • malonic semialdehyde

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 926-61-4
  • PUBCHEM:
  • HMDB : HMDB11111
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC33190
"CH](=O)CC([O-])=O" cannot be used as a page name in this wiki.



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