Difference between revisions of "RXN0-300"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thiol...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-300 RXN0-300] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxypyruvate reductase (NA...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-300 RXN0-300] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thiolase
+
** hydroxypyruvate reductase (NADP+)
−
** acetyl-_c-acetyltransferase
+
−
** 3-ketoacyl-_thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** Beta-ketothiolase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[3-KETOACYL-COA]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[OH-PYR]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[GLYCERATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 a 3-oxoacyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c]
+
** 1 NADPH[c] '''+''' 1 hydroxypyruvate[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 D-glycerate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3855]]
+
* Gene: [[Tiso_gene_15687]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21564 21564]
 
−
* PIR:
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01392 R01392]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P77525 P77525]
+
−
** [http://www.uniprot.org/uniprot/P28790 P28790]
+
−
** [http://www.uniprot.org/uniprot/P27796 P27796]
+
−
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
+
−
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
+
−
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
+
−
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
+
−
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
+
−
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
+
−
** [http://www.uniprot.org/uniprot/P21151 P21151]
+
−
** [http://www.uniprot.org/uniprot/P09110 P09110]
+
−
** [http://www.uniprot.org/uniprot/P13437 P13437]
+
−
** [http://www.uniprot.org/uniprot/P21775 P21775]
+
−
** [http://www.uniprot.org/uniprot/P07871 P07871]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thiolase}}
+
{{#set: common name=hydroxypyruvate reductase (NADP+)}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: ec number=EC-1.1.1}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: gene associated=Tiso_gene_15687}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: in pathway=}}
−
{{#set: common name=Beta-ketothiolase}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_10116}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:23, 21 March 2018

Reaction RXN0-300

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxypyruvate reductase (NADP+)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 hydroxypyruvate[c] + 1 H+[c] => 1 NADP+[c] + 1 D-glycerate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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