Difference between revisions of "MANNONDEHYDRAT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyll_chloroplastic * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannonate...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** chlorophyll_chloroplastic
+
** mannonate_dehydratase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
+
** [http://enzyme.expasy.org/EC/4.2.1.8 EC-4.2.1.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-7014]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CHLOROPHYLL-B]][c]
+
** 1 [[D-MANNONATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-DEHYDRO-3-DEOXY-D-GLUCONATE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 chlorophyllide b[c] '''+''' 1 phytyl diphosphate[c] '''+''' 2 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 chlorophyll b[c]
+
** 1 D-mannonate[c] '''=>''' 1 H2O[c] '''+''' 1 2-dehydro-3-deoxy-D-gluconate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_19542]]
+
* Gene: [[Tiso_gene_8331]]
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
+
*** Assignment: EC-NUMBER
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[annotation]]
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20097 20097]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R09067 R09067]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05606 R05606]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44488 P44488]
 +
** [http://www.uniprot.org/uniprot/Q9CF50 Q9CF50]
 +
** [http://www.uniprot.org/uniprot/P24215 P24215]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=chlorophyll_chloroplastic}}
+
{{#set: common name=mannonate_dehydratase}}
{{#set: ec number=EC-2.5.1.62}}
+
{{#set: ec number=EC-4.2.1.8}}
{{#set: gene associated=Tiso_gene_19542}}
+
{{#set: gene associated=Tiso_gene_8331}}
{{#set: in pathway=PWY-5068}}
+
{{#set: in pathway=PWY-7242}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=creinhardtii}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 21:24, 21 March 2018

Reaction MANNONDEHYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mannonate_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7242, D-fructuronate degradation: PWY-7242
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links