Difference between revisions of "Tiso gene 11604"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Gene == Gene Tiso_gene_11604 == * right end position: ** 7011 * transcription direction: ** POSITIVE * left end position: ** 4678 * centisome position: ** 60.8876...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] ==
+
== Gene Tiso_gene_11604 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 7011
−
* common name:
+
* transcription direction:
−
** strictosidine_synthase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/4.3.3.2 EC-4.3.3.2]
+
** 4678
 +
* centisome position:
 +
** 60.887676   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN0-305]]
−
** 1 [[TRYPTAMINE]][c] '''+''' 1 [[SECOLOGANIN-CPD]][c] '''=>''' 1 [[STRICTOSIDINE]][c] '''+''' 1 [[WATER]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 tryptamine[c] '''+''' 1 secologanin[c] '''=>''' 1 strictosidine[c] '''+''' 1 H2O[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_8474]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_8473]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
+
−
** '''1''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
+
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=7011}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=4678}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
+
{{#set: centisome position=60.887676    }}
−
* UNIPROT:
+
{{#set: reaction associated=RXN0-305}}
−
** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
+
−
** [http://www.uniprot.org/uniprot/P68175 P68175]
+
−
** [http://www.uniprot.org/uniprot/P18417 P18417]
+
−
** [http://www.uniprot.org/uniprot/P68174 P68174]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=strictosidine_synthase}}
+
−
{{#set: ec number=EC-4.3.3.2}}
+
−
{{#set: gene associated=Tiso_gene_8474|Tiso_gene_8473}}
+
−
{{#set: in pathway=PWY-5290|PWY-6326}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:24, 21 March 2018

Gene Tiso_gene_11604

  • right end position:
    • 7011
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4678
  • centisome position:
    • 60.887676
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11604&oldid=48466"