Difference between revisions of "GLUCOKIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_4483 == * left end position: ** 12130 * transcription direction: ** POSITIVE * right end position: ** 14707 * centisome position: ** 81.987...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucokinase ** hexoki...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_4483 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] ==
−
* left end position:
+
* direction:
−
** 12130
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** glucokinase
−
* right end position:
+
** hexokinase
−
** 14707
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/2.7.1.1 EC-2.7.1.1]
−
** 81.98716   
+
** [http://enzyme.expasy.org/EC/2.7.1.2 EC-2.7.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN0-5021]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 ATP[c] '''+''' 1 D-glucopyranose[c] '''=>''' 1 ADP[c] '''+''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_3107]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_1303]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 +
** '''11''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=12130}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17825 17825]
−
{{#set: right end position=14707}}
+
* LIGAND-RXN:
−
{{#set: centisome position=81.98716    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01786 R01786]
−
{{#set: reaction associated=RXN0-5021}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00299 R00299]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A6V8 P0A6V8]
 +
** [http://www.uniprot.org/uniprot/P21908 P21908]
 +
** [http://www.uniprot.org/uniprot/P64254 P64254]
 +
** [http://www.uniprot.org/uniprot/Q8XDH5 Q8XDH5]
 +
** [http://www.uniprot.org/uniprot/Q8XDH4 Q8XDH4]
 +
** [http://www.uniprot.org/uniprot/Q9CE25 Q9CE25]
 +
** [http://www.uniprot.org/uniprot/P52792 P52792]
 +
** [http://www.uniprot.org/uniprot/Q9V2Z6 Q9V2Z6]
 +
** [http://www.uniprot.org/uniprot/Q7M537 Q7M537]
 +
** [http://www.uniprot.org/uniprot/P17709 P17709]
 +
** [http://www.uniprot.org/uniprot/Q04409 Q04409]
 +
** [http://www.uniprot.org/uniprot/Q92407 Q92407]
 +
** [http://www.uniprot.org/uniprot/O31392 O31392]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glucokinase}}
 +
{{#set: common name=hexokinase}}
 +
{{#set: ec number=EC-2.7.1.1}}
 +
{{#set: ec number=EC-2.7.1.2}}
 +
{{#set: gene associated=Tiso_gene_3107|Tiso_gene_1303}}
 +
{{#set: in pathway=PWY0-1182|PWY-7238|GLYCOCAT-PWY|TREDEGLOW-PWY|PWY-621|PWY-7385|P124-PWY|PWY-5514|GLUCOSE1PMETAB-PWY|ANAGLYCOLYSIS-PWY|PWY-2723|P122-PWY|PWY-2722|PWY-5661}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction GLUCOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glucokinase
    • hexokinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1182, trehalose degradation II (trehalase): PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 6 reactions found over 8 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • TREDEGLOW-PWY, trehalose degradation I (low osmolarity): TREDEGLOW-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase): PWY-621
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 5 reactions found over 9 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 11 reactions found over 15 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
    • 5 reactions found over 7 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation: GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-2723, trehalose degradation V: PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • PWY-2722, trehalose degradation IV: PWY-2722
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5661, GDP-glucose biosynthesis: PWY-5661
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLUCOKIN-RXN&oldid=48516"