Difference between revisions of "UREASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] == * smiles: ** C(O)C([N+])C(=O)[O-] * inchi key: ** InChIKey=MTCFGRXMJLQNBG-REOHCLBHS...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UREASE-RXN UREASE-RXN] == * direction: ** REVERSIBLE * common name: ** urease ** urease_accessory_p...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UREASE-RXN UREASE-RXN] ==
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* smiles:
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* direction:
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** C(O)C([N+])C(=O)[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=MTCFGRXMJLQNBG-REOHCLBHSA-N
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* common name:
 
* common name:
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** L-serine
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** urease
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* molecular weight:
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** urease_accessory_protein
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** 105.093   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.1.5 EC-3.5.1.5]
 
* Synonym(s):
 
* Synonym(s):
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** S
 
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** serine
 
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** ser
 
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** L-ser
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-5641]]
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* With identifiers:
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* [[RME144]]
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** 2 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[UREA]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 2 [[AMMONIUM]][c]
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* [[RXN0-4083]]
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* With common name(s):
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* [[RXN0-2382]]
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** 2 H+[c] '''+''' 1 H2O[c] '''+''' 1 urea[c] '''<=>''' 1 CO2[c] '''+''' 2 ammonium[c]
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* [[SERINE--TRNA-LIGASE-RXN]]
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* [[RXN0-2161]]
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== Genes associated with this reaction  ==
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* [[5.1.1.18-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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* Gene: [[Tiso_gene_3909]]
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* [[4.3.1.17-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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* [[TRYPSYN-RXN]]
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*** Assignment: EC-NUMBER
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* [[SERINE-O-ACETTRAN-RXN]]
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** Source: [[annotation-experimental_annotation]]
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== Reaction(s) known to produce the compound ==
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*** Assignment: EC-NUMBER
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* [[RXN0-5114]]
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* Gene: [[Tiso_gene_794]]
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* [[RXN-14136]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN0-4083]]
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*** Assignment: EC-NUMBER
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-experimental_annotation]]
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* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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*** Assignment: EC-NUMBER
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* [[GLYOHMETRANS-RXN]]
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== Pathways  ==
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* [[PWY-5704]], urea degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5704 PWY-5704]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 56-45-1
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* LIGAND-RXN:
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* METABOLIGHTS : MTBLC33384
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** [http://www.genome.jp/dbget-bin/www_bget?R00131 R00131]
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857581 6857581]
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** [http://www.uniprot.org/uniprot/P17337 P17337]
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* HMDB : HMDB00187
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** [http://www.uniprot.org/uniprot/P18316 P18316]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q07399 Q07399]
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** [http://www.genome.jp/dbget-bin/www_bget?C00065 C00065]
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** [http://www.uniprot.org/uniprot/P44393 P44393]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P17338 P17338]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=33384 33384]
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** [http://www.uniprot.org/uniprot/Q07398 Q07398]
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* BIGG : ser__L
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** [http://www.uniprot.org/uniprot/P17088 P17088]
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{{#set: smiles=C(O)C([N+])C(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/Q03282 Q03282]
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{{#set: inchi key=InChIKey=MTCFGRXMJLQNBG-REOHCLBHSA-N}}
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** [http://www.uniprot.org/uniprot/Q9R5F8 Q9R5F8]
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{{#set: common name=L-serine}}
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** [http://www.uniprot.org/uniprot/P17339 P17339]
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{{#set: molecular weight=105.093    }}
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** [http://www.uniprot.org/uniprot/Q07397 Q07397]
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{{#set: common name=S|serine|ser|L-ser}}
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** [http://www.uniprot.org/uniprot/P17087 P17087]
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{{#set: consumed by=RXN-5641|RME144|RXN0-4083|RXN0-2382|SERINE--TRNA-LIGASE-RXN|RXN0-2161|5.1.1.18-RXN|SERINE-C-PALMITOYLTRANSFERASE-RXN|4.3.1.17-RXN|TRYPSYN-RXN|SERINE-O-ACETTRAN-RXN}}
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** [http://www.uniprot.org/uniprot/Q08716 Q08716]
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{{#set: produced by=RXN0-5114|RXN-14136|RXN0-4083}}
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** [http://www.uniprot.org/uniprot/P17086 P17086]
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{{#set: consumed or produced by=CYSTATHIONINE-BETA-SYNTHASE-RXN|GLYOHMETRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q9R2X6 Q9R2X6]
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** [http://www.uniprot.org/uniprot/Q9R5F6 Q9R5F6]
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** [http://www.uniprot.org/uniprot/Q9R5F5 Q9R5F5]
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** [http://www.uniprot.org/uniprot/Q9R5F4 Q9R5F4]
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** [http://www.uniprot.org/uniprot/P44391 P44391]
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** [http://www.uniprot.org/uniprot/P44392 P44392]
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** [http://www.uniprot.org/uniprot/P16124 P16124]
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** [http://www.uniprot.org/uniprot/P16123 P16123]
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** [http://www.uniprot.org/uniprot/P16122 P16122]
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** [http://www.uniprot.org/uniprot/P17274 P17274]
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** [http://www.uniprot.org/uniprot/P17273 P17273]
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** [http://www.uniprot.org/uniprot/P17272 P17272]
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** [http://www.uniprot.org/uniprot/P31496 P31496]
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** [http://www.uniprot.org/uniprot/Q08715 Q08715]
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** [http://www.uniprot.org/uniprot/P31494 P31494]
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** [http://www.uniprot.org/uniprot/P42875 P42875]
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** [http://www.uniprot.org/uniprot/P42874 P42874]
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** [http://www.uniprot.org/uniprot/P42873 P42873]
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** [http://www.uniprot.org/uniprot/Q9R5X1 Q9R5X1]
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** [http://www.uniprot.org/uniprot/Q41214 Q41214]
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** [http://www.uniprot.org/uniprot/P42887 P42887]
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** [http://www.uniprot.org/uniprot/P42886 P42886]
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** [http://www.uniprot.org/uniprot/P42885 P42885]
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** [http://www.uniprot.org/uniprot/P41022 P41022]
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** [http://www.uniprot.org/uniprot/P41021 P41021]
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** [http://www.uniprot.org/uniprot/P41020 P41020]
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** [http://www.uniprot.org/uniprot/P73796 P73796]
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** [http://www.uniprot.org/uniprot/P73061 P73061]
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** [http://www.uniprot.org/uniprot/P08298 P08298]
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** [http://www.uniprot.org/uniprot/O86508 O86508]
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** [http://www.uniprot.org/uniprot/O00084 O00084]
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** [http://www.uniprot.org/uniprot/Q9RFF5 Q9RFF5]
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** [http://www.uniprot.org/uniprot/Q9RFF4 Q9RFF4]
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** [http://www.uniprot.org/uniprot/Q9RFF2 Q9RFF2]
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** [http://www.uniprot.org/uniprot/P07374 P07374]
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** [http://www.uniprot.org/uniprot/P14916 P14916]
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** [http://www.uniprot.org/uniprot/P69996 P69996]
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** [http://www.uniprot.org/uniprot/P69997 P69997]
 +
{{#set: direction=REVERSIBLE}}
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{{#set: common name=urease}}
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{{#set: common name=urease_accessory_protein}}
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{{#set: ec number=EC-3.5.1.5}}
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{{#set: gene associated=Tiso_gene_3909|Tiso_gene_794}}
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{{#set: in pathway=PWY-5704}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction UREASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • urease
    • urease_accessory_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5704, urea degradation II: PWY-5704
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=UREASE-RXN&oldid=48518"