Difference between revisions of "RXN-12547"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLVALERATE-RXN METHYLVALERATE-RXN] == * direction: ** REVERSIBLE * common name: ** 3-methyl-2-o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12547 RXN-12547] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLVALERATE-RXN METHYLVALERATE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12547 RXN-12547] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** 3-methyl-2-oxobutanoate dehydrogenase [(S)-2-methylbutanoyl-transferring)
+
−
** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/2.3.1.76 EC-2.3.1.76]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c]
+
** 1 [[CPD-13524]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CHOCOLA_A]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c] '''<=>''' 1 CO2[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylbutanoyl]dihydrolipoyl-L-lysine[c]
+
** 1 all-trans-retinol[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 all-trans-retinyl palmitate[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3260]]
+
* Gene: [[Tiso_gene_20057]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_8889]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_20058]]
−
* [[Tiso_gene_18084]]
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_3902]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02367 R02367]
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
{{#set: ec number=EC-2.3.1.76}}
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
+
{{#set: gene associated=Tiso_gene_20057|Tiso_gene_8889|Tiso_gene_20058|Tiso_gene_3902}}
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
+
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
+
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
+
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
+
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
+
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
+
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
+
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
+
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
+
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
+
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
+
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
+
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
+
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
+
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
+
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=3-methyl-2-oxobutanoate dehydrogenase [(S)-2-methylbutanoyl-transferring)}}
+
−
{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
+
−
{{#set: ec number=EC-1.2.4.4}}
+
−
{{#set: gene associated=Tiso_gene_3260|Tiso_gene_18084}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:24, 21 March 2018

Reaction RXN-12547

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinol[c] + 1 palmitoyl-CoA[c] => 1 all-trans-retinyl palmitate[c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12547&oldid=48556"