Difference between revisions of "4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PELARGONIDIN-CMPD PELARGONIDIN-CMPD] == * smiles: ** C3(C(C2(=[O+]C1(C=C(C=C(C=1C=C2[O-])[O-])O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PELARGONIDIN-CMPD PELARGONIDIN-CMPD] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
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* smiles:
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* direction:
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** C3(C(C2(=[O+]C1(C=C(C=C(C=1C=C2[O-])[O-])O)))=CC=C(C=3)O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=XVFMGWDSJLBXDZ-UHFFFAOYSA-M
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* common name:
 
* common name:
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** pelargonidin
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** probable_gamma_hydroxybutyrate_dehydrogenase
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* molecular weight:
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** gamma_hydroxybutyrate_dehydrogenase
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** 269.233   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.61 EC-1.1.1.61]
 
* Synonym(s):
 
* Synonym(s):
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** 3,5,7-Trihydroxy-2-(4-hydroxyphenil)-1-benzopyrylium chloride
 
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** 3,4',5,7-tetrahydroxyflavylium chloride
 
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** 3,5,7-trihydroxy-2-(4-hydroxyphenyl)benzopyrylium chloride
 
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** 1-Benzopyrylium, 3,5,7-trihydroxy-2-(4-hydroxyphenyl)-, chloride
 
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** Flavylium, 3,4',5,7-tetrahydroxy-, chloride
 
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** Pelargonidin chloride
 
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** Pelargonidol chloride
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-9724]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[4-HYDROXY-BUTYRATE]][c]
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* [[LEUCPEL-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 succinate semialdehyde[c] '''=>''' 1 NAD+[c] '''+''' 1 4-hydroxybutanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_777]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_91]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5677]], succinate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5677 PWY-5677]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 134-04-3
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* RHEA:
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* LIPID_MAPS : LMPK12010003
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23948 23948]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657848 90657848]
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** [http://www.genome.jp/dbget-bin/www_bget?R01644 R01644]
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* HMDB : HMDB03263
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q59104 Q59104]
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** [http://www.genome.jp/dbget-bin/www_bget?C05904 C05904]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=25863 25863]
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{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
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* METABOLIGHTS : MTBLC25863
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{{#set: ec number=EC-1.1.1.61}}
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{{#set: smiles=C3(C(C2(=[O+]C1(C=C(C=C(C=1C=C2[O-])[O-])O)))=CC=C(C=3)O)}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
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{{#set: inchi key=InChIKey=XVFMGWDSJLBXDZ-UHFFFAOYSA-M}}
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{{#set: in pathway=PWY-5677|PWY-5022}}
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{{#set: common name=pelargonidin}}
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{{#set: reconstruction category=annotation}}
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{{#set: molecular weight=269.233    }}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=3,5,7-Trihydroxy-2-(4-hydroxyphenil)-1-benzopyrylium chloride|3,4',5,7-tetrahydroxyflavylium chloride|3,5,7-trihydroxy-2-(4-hydroxyphenyl)benzopyrylium chloride|1-Benzopyrylium, 3,5,7-trihydroxy-2-(4-hydroxyphenyl)-, chloride|Flavylium, 3,4',5,7-tetrahydroxy-, chloride|Pelargonidin chloride|Pelargonidol chloride}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=RXN-9724}}
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{{#set: produced by=LEUCPEL-RXN}}
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Latest revision as of 20:25, 21 March 2018

Reaction 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_gamma_hydroxybutyrate_dehydrogenase
    • gamma_hydroxybutyrate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 succinate semialdehyde[c] => 1 NAD+[c] + 1 4-hydroxybutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5677, succinate fermentation to butanoate: PWY-5677
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V: PWY-5022
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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