Difference between revisions of "DAHPSYN-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_7789 == * left end position: ** 6888 * transcription direction: ** POSITIVE * right end position: ** 9321 * centisome position: ** 63.74826...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAHPSYN-RXN DAHPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** phospho-2-dehydro-3-deoxyh...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_7789 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAHPSYN-RXN DAHPSYN-RXN] ==
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* left end position:
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* direction:
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** 6888
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** phospho-2-dehydro-3-deoxyheptonate_phe-sensitive
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* right end position:
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** 3-deoxy-7-phosphoheptulonate_synthase
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** 9321
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** ORF
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* centisome position:
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* ec number:
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** 63.748264   
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** [http://enzyme.expasy.org/EC/2.5.1.54 EC-2.5.1.54]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.6.3.1-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''+''' 1 [[Pi]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 phosphoenolpyruvate[c] '''+''' 1 D-erythrose 4-phosphate[c] '''+''' 1 H2O[c] '''<=>''' 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18937]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18975]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_7372]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8935]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8934]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6888}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14717 14717]
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{{#set: right end position=9321}}
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* LIGAND-RXN:
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{{#set: centisome position=63.748264    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01826 R01826]
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{{#set: reaction associated=3.6.3.1-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P0A1B5 P0A1B5]
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** [http://www.uniprot.org/uniprot/Q9JSQ8 Q9JSQ8]
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** [http://www.uniprot.org/uniprot/P00887 P00887]
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** [http://www.uniprot.org/uniprot/P0AB91 P0AB91]
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** [http://www.uniprot.org/uniprot/P00888 P00888]
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** [http://www.uniprot.org/uniprot/Q9PPJ1 Q9PPJ1]
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** [http://www.uniprot.org/uniprot/P46245 P46245]
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** [http://www.uniprot.org/uniprot/P35170 P35170]
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** [http://www.uniprot.org/uniprot/P44303 P44303]
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** [http://www.uniprot.org/uniprot/P34725 P34725]
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** [http://www.uniprot.org/uniprot/P39912 P39912]
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** [http://www.uniprot.org/uniprot/P14843 P14843]
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** [http://www.uniprot.org/uniprot/Q02285 Q02285]
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** [http://www.uniprot.org/uniprot/P32449 P32449]
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** [http://www.uniprot.org/uniprot/P37215 P37215]
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** [http://www.uniprot.org/uniprot/P37216 P37216]
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** [http://www.uniprot.org/uniprot/Q09755 Q09755]
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** [http://www.uniprot.org/uniprot/Q00218 Q00218]
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** [http://www.uniprot.org/uniprot/P29976 P29976]
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** [http://www.uniprot.org/uniprot/Q42921 Q42921]
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** [http://www.uniprot.org/uniprot/O22407 O22407]
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** [http://www.uniprot.org/uniprot/O52798 O52798]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=phospho-2-dehydro-3-deoxyheptonate_phe-sensitive}}
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{{#set: common name=3-deoxy-7-phosphoheptulonate_synthase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.5.1.54}}
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{{#set: gene associated=Tiso_gene_18937|Tiso_gene_18975|Tiso_gene_7372|Tiso_gene_8935|Tiso_gene_8934}}
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{{#set: in pathway=PWY-6164}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction DAHPSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • phospho-2-dehydro-3-deoxyheptonate_phe-sensitive
    • 3-deoxy-7-phosphoheptulonate_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6164, 3-dehydroquinate biosynthesis I: PWY-6164
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DAHPSYN-RXN&oldid=48683"