Difference between revisions of "3.2.1.152-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.152-RXN 3.2.1.152-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** endo-_-beta-mannosi...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.152-RXN 3.2.1.152-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** coumarins biosynthesis (engineered)
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** endo-_-beta-mannosidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.152 EC-3.2.1.152]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''13''' reactions in the full pathway
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* With identifiers:
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-7263]][c] '''=>''' 1 [[CPD-13935]][c] '''+''' 1 [[CPD-7265]][c]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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* With common name(s):
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* [[RXN-1126]]
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** 1 H2O[c] '''+''' 1 a α-D-mannosyl-(1->6)-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c] '''=>''' 1 α1,6-D mannobiose[c] '''+''' 1 an N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12349 RXN-12349]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12350 RXN-12350]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12963 RXN-12963]
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* Gene: [[Tiso_gene_17158]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12965 RXN-12965]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14987 RXN-14987]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14988 RXN-14988]
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* Gene: [[Tiso_gene_5241]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14990 RXN-14990]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16762 RXN-16762]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16763 RXN-16763]
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* Gene: [[Tiso_gene_15472]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9697 RXN-9697]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=endo-_-beta-mannosidase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-3.2.1.152}}
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{{#set: common name=coumarins biosynthesis (engineered)}}
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{{#set: gene associated=Tiso_gene_17158|Tiso_gene_5241|Tiso_gene_15472}}
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{{#set: reaction found=3}}
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{{#set: in pathway=}}
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{{#set: reaction not found=13}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=23.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction 3.2.1.152-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • endo-_-beta-mannosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a α-D-mannosyl-(1->6)-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c] => 1 α1,6-D mannobiose[c] + 1 an N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.2.1.152-RXN&oldid=40085"