Difference between revisions of "ALANINE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** polyketi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-AMINOTRANSFERASE-RXN ALANINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * common n...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-AMINOTRANSFERASE-RXN ALANINE-AMINOTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** alanine_aminotransferase_mitochondrial
−
** ORF
+
** alanine_aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.2 EC-2.6.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[ETOH]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 ethanol[c] '''<=>''' 1 acetaldehyde[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5424]]
+
* Gene: [[Tiso_gene_5959]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_6563]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_5425]]
+
** Source: [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_10957]]
−
* [[Tiso_gene_7649]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_18459]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_6562]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
+
* [[ALANINE-DEG3-PWY]], L-alanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-DEG3-PWY ALANINE-DEG3-PWY]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
+
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6587]], pyruvate fermentation to ethanol III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6587 PWY-6587]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6333]], acetaldehyde biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6333 PWY-6333]
+
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5486]], pyruvate fermentation to ethanol II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5486 PWY-5486]
+
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[P161-PWY]], acetylene degradation: [http://metacyc.org/META/NEW-IMAGE?object=P161-PWY P161-PWY]
+
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''10''' reactions in the full pathway
−
* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ETOH-ACETYLCOA-ANA-PWY ETOH-ACETYLCOA-ANA-PWY]
+
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-5480]], pyruvate fermentation to ethanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5480 PWY-5480]
+
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
+
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
−
** '''9''' reactions found over '''16''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-SYN2-PWY ALANINE-SYN2-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25290 25290]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19453 19453]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00754 R00754]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P13191 P13191]
 +
** [http://www.uniprot.org/uniprot/P25409 P25409]
 +
** [http://www.uniprot.org/uniprot/P24298 P24298]
 +
** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
 +
** [http://www.uniprot.org/uniprot/P34106 P34106]
 +
** [http://www.uniprot.org/uniprot/P52894 P52894]
 +
** [http://www.uniprot.org/uniprot/Q42685 Q42685]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=alanine_aminotransferase_mitochondrial}}
−
{{#set: common name=ORF}}
+
{{#set: common name=alanine_aminotransferase}}
−
{{#set: ec number=EC-1.1.1.1}}
+
{{#set: ec number=EC-2.6.1.2}}
−
{{#set: gene associated=Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_7649|Tiso_gene_18459|Tiso_gene_6562}}
+
{{#set: gene associated=Tiso_gene_5959|Tiso_gene_10957}}
−
{{#set: in pathway=PWY66-21|PWY4LZ-257|PWY-7118|PWY-6587|PWY-6333|PWY-5486|P161-PWY|ETOH-ACETYLCOA-ANA-PWY|P122-PWY|PWY-5480|FERMENTATION-PWY}}
+
{{#set: in pathway=ALANINE-DEG3-PWY|PWY-7383|PWY-7117|ALACAT2-PWY|PWY-7115|ALANINE-SYN2-PWY}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction source=synechocystis}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:22, 21 March 2018

Reaction ALANINE-AMINOTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • alanine_aminotransferase_mitochondrial
    • alanine_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ALANINE-DEG3-PWY, L-alanine degradation III: ALANINE-DEG3-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7383, anaerobic energy metabolism (invertebrates, cytosol): PWY-7383
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway
  • ALACAT2-PWY, L-alanine degradation II (to D-lactate): ALACAT2-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 7 reactions found over 9 reactions in the full pathway
  • ALANINE-SYN2-PWY, L-alanine biosynthesis II: ALANINE-SYN2-PWY
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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