Difference between revisions of "RXN-7978"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7978 RXN-7978] == * direction: ** LEFT-TO-RIGHT * common name: ** zeaxanthin_epoxidase * Synony...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7978 RXN-7978] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** zeaxanthin_epoxidase |
* Synonym(s): | * Synonym(s): | ||
| + | ** Zea-epoxidase | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | ''' | + | * With identifiers: |
| − | * [[ | + | ** 2 [[PROTON]][c] '''+''' 1 [[CPD1F-130]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[WATER]][c] |
| − | * [[ | + | * With common name(s): |
| − | * [[ | + | ** 2 H+[c] '''+''' 1 zeaxanthin[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 oxygen[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 antheraxanthin[c] '''+''' 1 H2O[c] |
| − | + | ||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_6386]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_10919]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07199 R07199] |
| − | {{#set: common name= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=zeaxanthin_epoxidase}} |
| − | {{#set: | + | {{#set: common name=Zea-epoxidase}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_6386|Tiso_gene_10919}} |
| + | {{#set: in pathway=PWY-5945}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:21, 21 March 2018
Contents
Reaction RXN-7978
- direction:
- LEFT-TO-RIGHT
- common name:
- zeaxanthin_epoxidase
- Synonym(s):
- Zea-epoxidase
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 1 CPD1F-130[c] + 2 Reduced-ferredoxins[c] + 1 OXYGEN-MOLECULE[c] => 2 Oxidized-ferredoxins[c] + 1 CPD1F-131[c] + 1 WATER[c]
- With common name(s):
- 2 H+[c] + 1 zeaxanthin[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 1 oxygen[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 antheraxanthin[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6386
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_10919
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-experimental_annotation
Pathways
- PWY-5945, zeaxanthin, antheraxanthin and violaxanthin interconversion: PWY-5945
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- LIGAND-RXN:
