Difference between revisions of "CYSTEINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** superpathway of ubiquinol-6 biosynthesis (eukaryotic)
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** cysteinyl-trna
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** cysteine--trna_ligase
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* ec number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.16 EC-6.1.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[PWY-7230]]
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** 1 [[CYS]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-CYS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-9003]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 L-cysteine[c] '''+''' 1 a tRNAcys[c] '''+''' 1 ATP[c] '''=>''' 1 an L-cysteinyl-[tRNAcys][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.114-RXN 2.1.1.114-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-12 RXN3O-12]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-58 RXN3O-58]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-73 RXN3O-73]
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* Gene: [[Tiso_gene_10881]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17657]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: common name=superpathway of ubiquinol-6 biosynthesis (eukaryotic)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: reaction not found=7}}
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** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
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{{#set: completion rate=29.0}}
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** [http://www.uniprot.org/uniprot/Q06752 Q06752]
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** [http://www.uniprot.org/uniprot/P43816 P43816]
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** [http://www.uniprot.org/uniprot/O29836 O29836]
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** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
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** [http://www.uniprot.org/uniprot/O58370 O58370]
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** [http://www.uniprot.org/uniprot/O83129 O83129]
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** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
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** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
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** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
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** [http://www.uniprot.org/uniprot/P41259 P41259]
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** [http://www.uniprot.org/uniprot/O51545 O51545]
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** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
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** [http://www.uniprot.org/uniprot/O67163 O67163]
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** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
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** [http://www.uniprot.org/uniprot/P47495 P47495]
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** [http://www.uniprot.org/uniprot/P75423 P75423]
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** [http://www.uniprot.org/uniprot/P74330 P74330]
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** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
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** [http://www.uniprot.org/uniprot/P21888 P21888]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cysteinyl-trna}}
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{{#set: common name=cysteine--trna_ligase}}
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{{#set: ec number=EC-6.1.1.16}}
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{{#set: gene associated=Tiso_gene_10881|Tiso_gene_17657}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:30, 21 March 2018

Reaction CYSTEINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteinyl-trna
    • cysteine--trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cysteine[c] + 1 a tRNAcys[c] + 1 ATP[c] => 1 an L-cysteinyl-[tRNAcys][c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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