Difference between revisions of "DIOHBUTANONEPSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribof...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** riboflavin_biosynthesis_protein |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.1.99.12 EC-4.1.99.12] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | ''' | + | * With identifiers: |
| − | * [[ | + | ** 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[PROTON]][c] |
| − | = | + | * With common name(s): |
| + | ** 1 D-ribulose 5-phosphate[c] '''=>''' 1 formate[c] '''+''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 H+[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_14275]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_19932]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18457 18457] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=riboflavin_biosynthesis_protein}} | ||
| + | {{#set: ec number=EC-4.1.99.12}} | ||
| + | {{#set: gene associated=Tiso_gene_14275|Tiso_gene_19932}} | ||
| + | {{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:34, 21 March 2018
Contents
Reaction DIOHBUTANONEPSYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- riboflavin_biosynthesis_protein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 RIBULOSE-5P[c] => 1 FORMATE[c] + 1 DIHYDROXY-BUTANONE-P[c] + 1 PROTON[c]
- With common name(s):
- 1 D-ribulose 5-phosphate[c] => 1 formate[c] + 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_14275
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19932
- Source: orthology-esiliculosus
Pathways
- PWY-6167, flavin biosynthesis II (archaea): PWY-6167
- 4 reactions found over 10 reactions in the full pathway
- PWY-6168, flavin biosynthesis III (fungi): PWY-6168
- 6 reactions found over 9 reactions in the full pathway
- RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
- 7 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
