Difference between revisions of "RXN-7693"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
 
* common name:
 
* common name:
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** all-trans-farnesol biosynthesis
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** polyketide_synthase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** trans,trans-farnesol biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[FPPSYN-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD-7032]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7031]][c]
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** [[GPPSYN-RXN]]
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* With common name(s):
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** [[IPPISOM-RXN]]
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** 1 NAD+[c] '''+''' 1 3-methylbutanol[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-methylbutanal[c]
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== Reaction(s) not found ==
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* '''1''' reaction(s) not found
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8617 RXN-8617]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6562]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7649]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5424]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5425]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6563]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: common name=all-trans-farnesol biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05685 R05685]
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{{#set: common name=trans,trans-farnesol biosynthesis}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=3}}
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{{#set: common name=polyketide_synthase}}
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{{#set: reaction not found=1}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: gene associated=Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_5425|Tiso_gene_6563}}
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{{#set: in pathway=PWY-5076|PWY-6871}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction RXN-7693

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3-methylbutanol[c] <=> 1 NADH[c] + 1 H+[c] + 1 3-methylbutanal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5076, L-leucine degradation III: PWY-5076
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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