Difference between revisions of "GUANOSINE-DIPHOSPHATASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLBILANE HYDROXYMETHYLBILANE] == * smiles: ** C(O)C1(NC(=C(CCC(=O)[O-])C(CC(=O)[O-])...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLBILANE HYDROXYMETHYLBILANE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] ==
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* smiles:
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* direction:
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** C(O)C1(NC(=C(CCC(=O)[O-])C(CC(=O)[O-])=1)CC2(=C(CC(=O)[O-])C(CCC(=O)[O-])=C(N2)CC4(=C(CC([O-])=O)C(CCC(=O)[O-])=C(CC3(=C(CC([O-])=O)C(CCC(=O)[O-])=CN3))N4)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WDFJYRZCZIUBPR-UHFFFAOYSA-F
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* common name:
 
* common name:
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** preuroporphyrinogen
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** ORF
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* molecular weight:
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* ec number:
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** 846.757   
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** [http://enzyme.expasy.org/EC/3.6.1.42 EC-3.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
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** hydroxymethylbilane
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[UROGENIIISYN-RXN]]
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* With identifiers:
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* [[RXN-14396]]
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** 1 [[GDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[OHMETHYLBILANESYN-RXN]]
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** 1 GDP[c] '''+''' 1 H2O[c] '''=>''' 1 GMP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12899]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_20236]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 73023-76-4
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* RHEA:
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* METABOLIGHTS : MTBLC57845
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22156 22156]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46931104 46931104]
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** [http://www.genome.jp/dbget-bin/www_bget?R00328 R00328]
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* HMDB : HMDB01137
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P32621 P32621]
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** [http://www.genome.jp/dbget-bin/www_bget?C01024 C01024]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=ORF}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57845 57845]
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{{#set: ec number=EC-3.6.1.42}}
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* BIGG : hmbil
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{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
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{{#set: smiles=C(O)C1(NC(=C(CCC(=O)[O-])C(CC(=O)[O-])=1)CC2(=C(CC(=O)[O-])C(CCC(=O)[O-])=C(N2)CC4(=C(CC([O-])=O)C(CCC(=O)[O-])=C(CC3(=C(CC([O-])=O)C(CCC(=O)[O-])=CN3))N4)))}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=WDFJYRZCZIUBPR-UHFFFAOYSA-F}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=preuroporphyrinogen}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: molecular weight=846.757    }}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=hydroxymethylbilane}}
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{{#set: consumed by=UROGENIIISYN-RXN|RXN-14396}}
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{{#set: produced by=OHMETHYLBILANESYN-RXN}}
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Latest revision as of 19:23, 21 March 2018

Reaction GUANOSINE-DIPHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP[c] + 1 H2O[c] => 1 GMP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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