Difference between revisions of "PWY490-3"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-183963]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 
* common name:
 
* common name:
−
** methylaspartate cycle
+
** nitrate reduction VI (assimilatory)
 
* Synonym(s):
 
* Synonym(s):
 +
** nitrate assimilation
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''11''' reactions found over '''18''' reactions in the full pathway
+
  '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[ACONITATEDEHYDR-RXN]]
+
* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_13007]]
+
*** [[Tiso_gene_7919]]
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-synechocystis]]
+
−
* [[ACONITATEHYDR-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_13007]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
* [[CITSYN-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_18030]]
+
−
*** [[Tiso_gene_9601]]
+
−
*** [[Tiso_gene_9603]]
+
−
*** [[Tiso_gene_9602]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[FUMHYDR-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_6720]]
+
−
*** [[Tiso_gene_3691]]
+
 
** 6 reconstruction source(s) associated:
 
** 6 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
Line 41: Line 18:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
−
*** [[orthology-creinhardtii]]
+
* [[GLUTAMINESYN-RXN]]
−
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
** 4 associated gene(s):
−
** 1 associated gene(s):
+
*** [[Tiso_gene_14842]]
−
*** [[Tiso_gene_2337]]
+
*** [[Tiso_gene_13754]]
−
** 2 reconstruction source(s) associated:
+
*** [[Tiso_gene_13820]]
−
*** [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_6647]]
−
*** [[orthology-esiliculosus]]
+
** 6 reconstruction source(s) associated:
−
* [[ISOCITDEH-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_18262]]
+
−
*** [[Tiso_gene_10809]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[MALATE-DEH-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_1990]]
+
−
*** [[Tiso_gene_2323]]
+
−
** 7 reconstruction source(s) associated:
+
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
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*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
−
*** [[orthology-creinhardtii]]
+
* [[GLUTDEHYD-RXN]]
−
* [[MALSYN-RXN]]
+
** 3 associated gene(s):
−
** 1 associated gene(s):
+
*** [[Tiso_gene_2581]]
−
*** [[Tiso_gene_14377]]
+
*** [[Tiso_gene_1154]]
 +
*** [[Tiso_gene_11511]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[annotation-experimental_annotation]]
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-esiliculosus]]
+
*** [[manual-primary_network]]
−
* [[METHYLMALONYL-COA-MUT-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_9771]]
+
−
** 2 reconstruction source(s) associated:
+
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
−
*** [[annotation-in-silico_annotation]]
 
−
* [[PROPIONYL-COA-CARBOXY-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_5029]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[orthology-esiliculosus]]
 
−
* [[SUCCCOASYN-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Tiso_gene_15846]]
 
−
*** [[Tiso_gene_11866]]
 
−
** 7 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-AMMONIA-LYASE-RXN METHYLASPARTATE-AMMONIA-LYASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.7.7.2-RXN 1.7.7.2-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-MUTASE-RXN METHYLASPARTATE-MUTASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12168 RXN-12168]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-183963}}
+
{{#set: taxonomic range=TAX-1117}}
−
{{#set: common name=methylaspartate cycle}}
+
{{#set: common name=nitrate reduction VI (assimilatory)}}
−
{{#set: reaction found=11}}
+
{{#set: common name=nitrate assimilation}}
−
{{#set: total reaction=18}}
+
{{#set: reaction found=3}}
−
{{#set: completion rate=61.0}}
+
{{#set: total reaction=4}}
 +
{{#set: completion rate=75.0}}

Latest revision as of 19:04, 21 March 2018

Pathway PWY490-3

  • taxonomic range:
  • common name:
    • nitrate reduction VI (assimilatory)
  • Synonym(s):
    • nitrate assimilation

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY490-3&oldid=39342"