Difference between revisions of "PWY-7115"

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(Created page with "Category:Gene == Gene Tiso_gene_18028 == * left end position: ** 573 * transcription direction: ** POSITIVE * right end position: ** 3205 * centisome position: ** 17.32688...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_18028 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115] ==
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* left end position:
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* taxonomic range:
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** 573
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* transcription direction:
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* common name:
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** POSITIVE
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** C4 photosynthetic carbon assimilation cycle, NAD-ME type
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* right end position:
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** 3205
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* centisome position:
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** 17.326883   
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* Synonym(s):
 
* Synonym(s):
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** C4 photosynthesis, NAD-ME type
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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'''7''' reactions found over '''9''' reactions in the full pathway
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** in-silico_annotation
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* [[1.1.1.39-RXN]]
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***ec-number
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** 3 associated gene(s):
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== Pathways associated ==
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*** [[Tiso_gene_12896]]
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*** [[Tiso_gene_6675]]
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*** [[Tiso_gene_12200]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ALANINE-AMINOTRANSFERASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_5959]]
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*** [[Tiso_gene_10957]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[ASPAMINOTRANS-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_17718]]
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*** [[Tiso_gene_6815]]
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*** [[Tiso_gene_13538]]
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*** [[Tiso_gene_15680]]
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*** [[Tiso_gene_17809]]
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*** [[Tiso_gene_12889]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-13697]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_13538]]
 +
*** [[Tiso_gene_12889]]
 +
*** [[Tiso_gene_6815]]
 +
*** [[Tiso_gene_17718]]
 +
*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_15680]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN-13698]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_10957]]
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*** [[Tiso_gene_5959]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN0-5224]]
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** 10 associated gene(s):
 +
*** [[Tiso_gene_18927]]
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*** [[Tiso_gene_6150]]
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*** [[Tiso_gene_1600]]
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*** [[Tiso_gene_3056]]
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*** [[Tiso_gene_9852]]
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*** [[Tiso_gene_17511]]
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*** [[Tiso_gene_19413]]
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*** [[Tiso_gene_20230]]
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*** [[Tiso_gene_19414]]
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*** [[Tiso_gene_7660]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=573}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=C4 photosynthetic carbon assimilation cycle, NAD-ME type}}
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{{#set: right end position=3205}}
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{{#set: common name=C4 photosynthesis, NAD-ME type}}
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{{#set: centisome position=17.326883    }}
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{{#set: reaction found=7}}
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: total reaction=9}}
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{{#set: completion rate=78.0}}

Latest revision as of 19:05, 21 March 2018

Pathway PWY-7115

  • taxonomic range:
  • common name:
    • C4 photosynthetic carbon assimilation cycle, NAD-ME type
  • Synonym(s):
    • C4 photosynthesis, NAD-ME type

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7115&oldid=39436"