Difference between revisions of "Tiso gene 348"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=X5NT X5NT] == * direction: ** LEFT-TO-RIGHT * common name: ** XMP-5'-nucleotidase * Synonym(s): ==...")
(Created page with "Category:Gene == Gene Tiso_gene_348 == * right end position: ** 34578 * transcription direction: ** POSITIVE * left end position: ** 30916 * centisome position: ** 87.8994...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=X5NT X5NT] ==
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== Gene Tiso_gene_348 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 34578
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* common name:
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* transcription direction:
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** XMP-5'-nucleotidase
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** POSITIVE
 +
* left end position:
 +
** 30916
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* centisome position:
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** 87.89947   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACYLCOASYN-RXN]]
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** 1.0 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[Pi]][c] '''+''' 1.0 [[XANTHOSINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1.0 XMP[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 phosphate[c] '''+''' 1.0 xanthosine[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[LINOLENOYL-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_6988]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_9166]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[R223-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-12184]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-12978]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-13290]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-13614]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16380]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16389]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16393]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16401]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
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* Reaction: [[RXN-16402]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16415]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16418]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-7904]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9623]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-9644]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9673]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN0-7238]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN0-7239]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN0-7248]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-469]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-477]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-480]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
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* Reaction: [[RXN66-483]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-484]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[TRANS-RXN0-623]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
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* [[PWY-6920]]
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* [[P221-PWY]]
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* [[PWY-321]]
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* [[PWY-5972]]
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* [[PWY-5971]]
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* [[PWY-7033]]
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* [[PWY-5136]]
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* [[PWY66-389]]
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* [[PWY-7288]]
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* [[PWY-6733]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[FAO-PWY]]
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* [[PWY-1121]]
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* [[PWY-6873]]
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* [[PWY-5147]]
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* [[PWY-5143]]
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* [[PWY-5885]]
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* [[PWY-7724]]
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* [[PWY-6001]]
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* [[PWY-6000]]
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* [[PWY-7049]]
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* [[PWY66-387]]
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* [[PWY-5989]]
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* [[PWY-6803]]
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* [[PWY66-388]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=34578}}
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{{#set: common name=XMP-5'-nucleotidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_6988|Tiso_gene_9166}}
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{{#set: left end position=30916}}
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{{#set: in pathway=}}
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{{#set: centisome position=87.89947    }}
−
{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=ACYLCOASYN-RXN|LINOLENOYL-RXN|R223-RXN|RXN-12184|RXN-12978|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-7904|RXN-9623|RXN-9644|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: pathway associated=PWY-6920|P221-PWY|PWY-321|PWY-5972|PWY-5971|PWY-7033|PWY-5136|PWY66-389|PWY-7288|PWY-6733|PWY-7094|PWY66-391|FAO-PWY|PWY-1121|PWY-6873|PWY-5147|PWY-5143|PWY-5885|PWY-7724|PWY-6001|PWY-6000|PWY-7049|PWY66-387|PWY-5989|PWY-6803|PWY66-388}}
−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:06, 21 March 2018

Gene Tiso_gene_348

  • right end position:
    • 34578
  • transcription direction:
    • POSITIVE
  • left end position:
    • 30916
  • centisome position:
    • 87.89947
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_348&oldid=39512"