Difference between revisions of "XANTHOSINE"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE XANTHOSINE] == * smiles: ** C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23))) * commo...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Metabolite]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE XANTHOSINE] ==
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* taxonomic range:
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* smiles:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23)))
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** tRNA charging
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** xanthosine
 +
* inchi key:
 +
** InChIKey=UBORTCNDUKBEOP-UUOKFMHZSA-N
 +
* molecular weight:
 +
** 284.228   
 
* Synonym(s):
 
* Synonym(s):
 +
** 9 β-D-ribofuranosylxanthine
  
−
== Reaction(s) found ==
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== Reaction(s) known to consume the compound ==
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'''21''' reactions found over '''21''' reactions in the full pathway
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* [[RXN0-363]]
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* [[ALANINE--TRNA-LIGASE-RXN]]
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* [[XANTHOSINEPHOSPHORY-RXN]]
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** 5 associated gene(s):
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== Reaction(s) known to produce the compound ==
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*** [[Tiso_gene_2298]]
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* [[X5NT]]
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*** [[Tiso_gene_3249]]
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* [[XMPXAN-RXN]]
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*** [[Tiso_gene_18607]]
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== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_18609]]
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*** [[Tiso_gene_19573]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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* [[ARGININE--TRNA-LIGASE-RXN]]
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−
** 2 associated gene(s):
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−
*** [[Tiso_gene_12997]]
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*** [[Tiso_gene_16360]]
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** 3 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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−
** 5 associated gene(s):
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*** [[Tiso_gene_9303]]
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*** [[Tiso_gene_9304]]
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*** [[Tiso_gene_9908]]
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*** [[Tiso_gene_13908]]
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*** [[Tiso_gene_6065]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
* [[ASPARTATE--TRNA-LIGASE-RXN]]
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−
** 3 associated gene(s):
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−
*** [[Tiso_gene_17185]]
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−
*** [[Tiso_gene_7126]]
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−
*** [[Tiso_gene_13081]]
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** 3 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
* [[CYSTEINE--TRNA-LIGASE-RXN]]
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−
** 2 associated gene(s):
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−
*** [[Tiso_gene_10881]]
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−
*** [[Tiso_gene_17657]]
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−
** 3 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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−
* [[GLURS-RXN]]
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** 2 associated gene(s):
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−
*** [[Tiso_gene_5379]]
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−
*** [[Tiso_gene_5046]]
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−
** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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−
** 3 associated gene(s):
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−
*** [[Tiso_gene_5915]]
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*** [[Tiso_gene_11124]]
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*** [[Tiso_gene_7596]]
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** 3 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-esiliculosus]]
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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−
** 3 associated gene(s):
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−
*** [[Tiso_gene_14743]]
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*** [[Tiso_gene_14742]]
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−
*** [[Tiso_gene_3788]]
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−
** 3 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
* [[HISTIDINE--TRNA-LIGASE-RXN]]
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−
** 3 associated gene(s):
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*** [[Tiso_gene_12634]]
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*** [[Tiso_gene_13414]]
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*** [[Tiso_gene_8798]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_12496]]
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*** [[Tiso_gene_11779]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[LEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11524]]
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*** [[Tiso_gene_15439]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[LYSINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6705]]
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*** [[Tiso_gene_16635]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_284]]
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*** [[Tiso_gene_406]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_16467]]
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*** [[Tiso_gene_4232]]
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*** [[Tiso_gene_16650]]
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*** [[Tiso_gene_1625]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11974]]
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*** [[Tiso_gene_14791]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-16165]]
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** 2 associated gene(s):
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*** [[Tiso_gene_406]]
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*** [[Tiso_gene_284]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[SERINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_1682]]
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*** [[Tiso_gene_10015]]
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*** [[Tiso_gene_1684]]
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*** [[Tiso_gene_587]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[THREONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_13142]]
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*** [[Tiso_gene_4406]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14318]]
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*** [[Tiso_gene_14319]]
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−
*** [[Tiso_gene_12988]]
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** 3 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-esiliculosus]]
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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−
*** [[Tiso_gene_4174]]
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*** [[Tiso_gene_12171]]
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−
*** [[Tiso_gene_10378]]
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−
*** [[Tiso_gene_4175]]
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−
** 3 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
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−
* [[VALINE--TRNA-LIGASE-RXN]]
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−
** 2 associated gene(s):
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−
*** [[Tiso_gene_1372]]
+
−
*** [[Tiso_gene_8041]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
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−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
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* CAS : 146-80-5
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* BIGG : xtsn
−
{{#set: taxonomic range=TAX-2759}}
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* PUBCHEM:
−
{{#set: taxonomic range=TAX-2}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=64959 64959]
−
{{#set: taxonomic range=TAX-2157}}
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* HMDB : HMDB00299
−
{{#set: common name=tRNA charging}}
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* LIGAND-CPD:
−
{{#set: reaction found=21}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01762 C01762]
−
{{#set: total reaction=21}}
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* CHEMSPIDER:
−
{{#set: completion rate=100.0}}
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** [http://www.chemspider.com/Chemical-Structure.1152.html 1152]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18107 18107]
 +
* METABOLIGHTS : MTBLC18107
 +
{{#set: smiles=C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23)))}}
 +
{{#set: common name=xanthosine}}
 +
{{#set: inchi key=InChIKey=UBORTCNDUKBEOP-UUOKFMHZSA-N}}
 +
{{#set: molecular weight=284.228    }}
 +
{{#set: common name=9 β-D-ribofuranosylxanthine}}
 +
{{#set: consumed by=RXN0-363|XANTHOSINEPHOSPHORY-RXN}}
 +
{{#set: produced by=X5NT|XMPXAN-RXN}}

Latest revision as of 20:06, 21 March 2018

Metabolite XANTHOSINE

  • smiles:
    • C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23)))
  • common name:
    • xanthosine
  • inchi key:
    • InChIKey=UBORTCNDUKBEOP-UUOKFMHZSA-N
  • molecular weight:
    • 284.228
  • Synonym(s):
    • 9 β-D-ribofuranosylxanthine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 146-80-5
  • BIGG : xtsn
  • PUBCHEM:
  • HMDB : HMDB00299
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC18107




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=XANTHOSINE&oldid=39544"