Difference between revisions of "XANTHOSINE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE XANTHOSINE] == * smiles: ** C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23))) * commo...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Metabolite]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE XANTHOSINE] ==
−
* taxonomic range:
+
* smiles:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23)))
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
 
* common name:
 
* common name:
−
** tRNA charging
+
** xanthosine
 +
* inchi key:
 +
** InChIKey=UBORTCNDUKBEOP-UUOKFMHZSA-N
 +
* molecular weight:
 +
** 284.228   
 
* Synonym(s):
 
* Synonym(s):
 +
** 9 β-D-ribofuranosylxanthine
  
−
== Reaction(s) found ==
+
== Reaction(s) known to consume the compound ==
−
'''21''' reactions found over '''21''' reactions in the full pathway
+
* [[RXN0-363]]
−
* [[ALANINE--TRNA-LIGASE-RXN]]
+
* [[XANTHOSINEPHOSPHORY-RXN]]
−
** 5 associated gene(s):
+
== Reaction(s) known to produce the compound ==
−
*** [[Tiso_gene_2298]]
+
* [[X5NT]]
−
*** [[Tiso_gene_3249]]
+
* [[XMPXAN-RXN]]
−
*** [[Tiso_gene_18607]]
+
== Reaction(s) of unknown directionality ==
−
*** [[Tiso_gene_18609]]
+
−
*** [[Tiso_gene_19573]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[ARGININE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_12997]]
+
−
*** [[Tiso_gene_16360]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
+
−
** 5 associated gene(s):
+
−
*** [[Tiso_gene_9303]]
+
−
*** [[Tiso_gene_9304]]
+
−
*** [[Tiso_gene_9908]]
+
−
*** [[Tiso_gene_13908]]
+
−
*** [[Tiso_gene_6065]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[ASPARTATE--TRNA-LIGASE-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_17185]]
+
−
*** [[Tiso_gene_7126]]
+
−
*** [[Tiso_gene_13081]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[CYSTEINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_10881]]
+
−
*** [[Tiso_gene_17657]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[GLURS-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_5379]]
+
−
*** [[Tiso_gene_5046]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_5915]]
+
−
*** [[Tiso_gene_11124]]
+
−
*** [[Tiso_gene_7596]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[GLYCINE--TRNA-LIGASE-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_14743]]
+
−
*** [[Tiso_gene_14742]]
+
−
*** [[Tiso_gene_3788]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[HISTIDINE--TRNA-LIGASE-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_12634]]
+
−
*** [[Tiso_gene_13414]]
+
−
*** [[Tiso_gene_8798]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_12496]]
+
−
*** [[Tiso_gene_11779]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[LEUCINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_11524]]
+
−
*** [[Tiso_gene_15439]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[LYSINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_6705]]
+
−
*** [[Tiso_gene_16635]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[METHIONINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_284]]
+
−
*** [[Tiso_gene_406]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_16467]]
+
−
*** [[Tiso_gene_4232]]
+
−
*** [[Tiso_gene_16650]]
+
−
*** [[Tiso_gene_1625]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[PROLINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_11974]]
+
−
*** [[Tiso_gene_14791]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RXN-16165]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_406]]
+
−
*** [[Tiso_gene_284]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
* [[SERINE--TRNA-LIGASE-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_1682]]
+
−
*** [[Tiso_gene_10015]]
+
−
*** [[Tiso_gene_1684]]
+
−
*** [[Tiso_gene_587]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[THREONINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_13142]]
+
−
*** [[Tiso_gene_4406]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Tiso_gene_14318]]
+
−
*** [[Tiso_gene_14319]]
+
−
*** [[Tiso_gene_12988]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[TYROSINE--TRNA-LIGASE-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_4174]]
+
−
*** [[Tiso_gene_12171]]
+
−
*** [[Tiso_gene_10378]]
+
−
*** [[Tiso_gene_4175]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[VALINE--TRNA-LIGASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_1372]]
+
−
*** [[Tiso_gene_8041]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* CAS : 146-80-5
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* BIGG : xtsn
−
{{#set: taxonomic range=TAX-2759}}
+
* PUBCHEM:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=64959 64959]
−
{{#set: taxonomic range=TAX-2157}}
+
* HMDB : HMDB00299
−
{{#set: common name=tRNA charging}}
+
* LIGAND-CPD:
−
{{#set: reaction found=21}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C01762 C01762]
−
{{#set: total reaction=21}}
+
* CHEMSPIDER:
−
{{#set: completion rate=100.0}}
+
** [http://www.chemspider.com/Chemical-Structure.1152.html 1152]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18107 18107]
 +
* METABOLIGHTS : MTBLC18107
 +
{{#set: smiles=C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23)))}}
 +
{{#set: common name=xanthosine}}
 +
{{#set: inchi key=InChIKey=UBORTCNDUKBEOP-UUOKFMHZSA-N}}
 +
{{#set: molecular weight=284.228    }}
 +
{{#set: common name=9 β-D-ribofuranosylxanthine}}
 +
{{#set: consumed by=RXN0-363|XANTHOSINEPHOSPHORY-RXN}}
 +
{{#set: produced by=X5NT|XMPXAN-RXN}}

Latest revision as of 19:06, 21 March 2018

Metabolite XANTHOSINE

  • smiles:
    • C(O)C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(=O)NC=23)))
  • common name:
    • xanthosine
  • inchi key:
    • InChIKey=UBORTCNDUKBEOP-UUOKFMHZSA-N
  • molecular weight:
    • 284.228
  • Synonym(s):
    • 9 β-D-ribofuranosylxanthine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 146-80-5
  • BIGG : xtsn
  • PUBCHEM:
  • HMDB : HMDB00299
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC18107




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=XANTHOSINE&oldid=39544"