Difference between revisions of "TROPINE-DEHYDROGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mitochondrial_malic_e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * ec number: **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
−
* common name:
+
−
** mitochondrial_malic_enzyme
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−
** ORF
+
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
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** [http://enzyme.expasy.org/EC/1.1.1.206 EC-1.1.1.206]
−
** [http://enzyme.expasy.org/EC/1.1.1.39 EC-1.1.1.39]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[NADP]][c] '''+''' 1 [[TROPINE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[TROPINONE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-malate[c] '''+''' 1 NAD+[c] '''=>''' 1 CO2[c] '''+''' 1 pyruvate[c] '''+''' 1 NADH[c]
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** 1 NADP+[c] '''+''' 1 tropine[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 tropinone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12896]]
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* Gene: [[Tiso_gene_15179]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_6675]]
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* Gene: [[Tiso_gene_15180]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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−
** EXPERIMENTAL_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_12200]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-3641]], L-carnitine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641]
+
* [[PWY-5317]], hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5317 PWY-5317]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
* [[PWY-7341]], superpathway of hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7341 PWY-7341]
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** '''13''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
+
−
** '''7''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-7686]], L-malate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12653 12653]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18360 18360]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
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** [http://www.genome.jp/dbget-bin/www_bget?R02832 R02832]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
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** [http://www.uniprot.org/uniprot/Q48662 Q48662]
+
{{#set: ec number=EC-1.1.1.206}}
−
** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
+
{{#set: gene associated=Tiso_gene_15179|Tiso_gene_15180}}
−
** [http://www.uniprot.org/uniprot/O59029 O59029]
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{{#set: in pathway=PWY-5317|PWY-7341}}
−
** [http://www.uniprot.org/uniprot/P16468 P16468]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/P26616 P26616]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
+
−
** [http://www.uniprot.org/uniprot/P37224 P37224]
+
−
** [http://www.uniprot.org/uniprot/P37225 P37225]
+
−
** [http://www.uniprot.org/uniprot/P37221 P37221]
+
−
** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
+
−
** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=mitochondrial_malic_enzyme}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-1.1.1.38}}
+
−
{{#set: ec number=EC-1.1.1.39}}
+
−
{{#set: gene associated=Tiso_gene_12896|Tiso_gene_6675|Tiso_gene_12200}}
+
−
{{#set: in pathway=PWY-3641|GLUCONEO-PWY|PWY-7384|PWY-7686|PWY-7115|PWY-7118}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:06, 21 March 2018

Reaction TROPINE-DEHYDROGENASE-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 tropine[c] <=> 1 H+[c] + 1 NADPH[c] + 1 tropinone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5317, hyoscyamine and scopolamine biosynthesis: PWY-5317
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7341, superpathway of hyoscyamine and scopolamine biosynthesis: PWY-7341
    • 2 reactions found over 12 reactions in the full pathway

Reconstruction information

External links




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