Difference between revisions of "PWY-4984"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5162 PWY-5162] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5162 PWY-5162] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** 2-oxopentenoate degradation
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** urea cycle
 
* Synonym(s):
 
* Synonym(s):
** 2-oxopent-4-enoate degradation
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** Krebs ornithine cycle
** 2-ketopentenoate degradation
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** Krebs-Henseleit cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''1''' reactions found over '''3''' reactions in the full pathway
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  '''5''' reactions found over '''5''' reactions in the full pathway
* [[ACETALD-DEHYDROG-RXN]]
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* [[ARGINASE-RXN]]
** 2 associated gene(s):
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** 1 associated gene(s):
*** [[Tiso_gene_7649]]
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*** [[Tiso_gene_4415]]
*** [[Tiso_gene_2052]]
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** 4 reconstruction source(s) associated:
** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ARGSUCCINLYA-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_2485]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 +
* [[ARGSUCCINSYN-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_12592]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ORNCARBAMTRANSFER-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18444]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN-13202]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_4976]]
 +
*** [[Tiso_gene_4685]]
 +
*** [[Tiso_gene_4975]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOPENT-4-ENOATE-HYDRATASE-RXN 2-OXOPENT-4-ENOATE-HYDRATASE-RXN]
 
* [http://metacyc.org/META/NEW-IMAGE?object=MHPELY-RXN MHPELY-RXN]
 
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
{{#set: taxonomic range=TAX-2}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5162 PWY-5162]
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{{#set: taxonomic range=TAX-2759}}
{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=urea cycle}}
{{#set: common name=2-oxopentenoate degradation}}
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{{#set: common name=Krebs ornithine cycle|Krebs-Henseleit cycle}}
{{#set: common name=2-oxopent-4-enoate degradation|2-ketopentenoate degradation}}
+
{{#set: reaction found=5}}
{{#set: reaction found=1}}
+
{{#set: total reaction=5}}
{{#set: total reaction=3}}
+
{{#set: completion rate=100.0}}
{{#set: completion rate=33.0}}
+

Latest revision as of 19:07, 21 March 2018

Pathway PWY-4984

  • taxonomic range:
  • common name:
    • urea cycle
  • Synonym(s):
    • Krebs ornithine cycle
    • Krebs-Henseleit cycle

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links