Difference between revisions of "PYRIDOXSYN-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** caffeine degradation III (bacteria, via demethylation)
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** pyridoxal 5'-phosphate biosynthesis I
 
* Synonym(s):
 
* Synonym(s):
** caffeine degradation (bacteria)
+
** vitamin B6 biosynthesis
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''2''' reactions found over '''7''' reactions in the full pathway
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  '''3''' reactions found over '''8''' reactions in the full pathway
* [[RXN0-901]]
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* [[DXS-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Tiso_gene_11775]]
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*** [[Tiso_gene_17311]]
** 2 reconstruction source(s) associated:
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** 7 reconstruction source(s) associated:
*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
* [[XANTHINE-OXIDASE-RXN]]
 
** 1 associated gene(s):
 
*** [[Tiso_gene_11775]]
 
** 1 reconstruction source(s) associated:
 
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PNPOXI-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_1471]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PSERTRANSAMPYR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_17123]]
 +
*** [[Tiso_gene_15686]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11513 RXN-11513]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.262-RXN 1.1.1.262-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11516 RXN-11516]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ERYTH4PDEHYDROG-RXN ERYTH4PDEHYDROG-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11517 RXN-11517]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ERYTHRON4PDEHYDROG-RXN ERYTHRON4PDEHYDROG-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11518 RXN-11518]
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* [http://metacyc.org/META/NEW-IMAGE?object=PDXJ-RXN PDXJ-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13106 RXN-13106]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8447 RXN-8447]
 
== External links  ==
 
== External links  ==
* LIGAND-MAP:
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* ECOCYC:
** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
* UM-BBD-PWY : caf
+
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
{{#set: common name=caffeine degradation III (bacteria, via demethylation)}}
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{{#set: common name=pyridoxal 5'-phosphate biosynthesis I}}
{{#set: common name=caffeine degradation (bacteria)}}
+
{{#set: common name=vitamin B6 biosynthesis}}
{{#set: reaction found=2}}
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{{#set: reaction found=3}}
{{#set: total reaction=7}}
+
{{#set: total reaction=8}}
{{#set: completion rate=29.0}}
+
{{#set: completion rate=38.0}}

Latest revision as of 19:08, 21 March 2018

Pathway PYRIDOXSYN-PWY

  • taxonomic range:
  • common name:
    • pyridoxal 5'-phosphate biosynthesis I
  • Synonym(s):
    • vitamin B6 biosynthesis

Reaction(s) found

3 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links