Difference between revisions of "PWY0-1507"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_chloroplastic * ec nu...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** protein_chloroplastic
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** biotin biosynthesis from 8-amino-7-oxononanoate I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.99.20 EC-4.2.99.20]
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* Synonym(s):
 
* Synonym(s):
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** biotin biosynthesis from 7-keto-8-aminopelargonate
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[CPD-9924]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CPD-9923]][c]
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* [[2.8.1.6-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] '''=>''' 1 pyruvate[c] '''+''' 1 (1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate[c]
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*** [[Tiso_gene_10345]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_1922]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[DAPASYN-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_11635]]
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* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
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** 3 reconstruction source(s) associated:
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-athaliana]]
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== Reconstruction information  ==
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*** [[orthology-creinhardtii]]
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* Category: [[annotation]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[DETHIOBIOTIN-SYN-RXN]]
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*** Tool: [[pathwaytools]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11635]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25597 25597]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08166 R08166]
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{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: common name=biotin biosynthesis from 8-amino-7-oxononanoate I}}
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{{#set: ec number=EC-4.2.99.20}}
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{{#set: common name=biotin biosynthesis from 7-keto-8-aminopelargonate}}
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{{#set: gene associated=Tiso_gene_1922}}
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{{#set: reaction found=3}}
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{{#set: in pathway=PWY-5837}}
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{{#set: total reaction=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:08, 21 March 2018

Pathway PWY0-1507

  • taxonomic range:
  • common name:
    • biotin biosynthesis from 8-amino-7-oxononanoate I
  • Synonym(s):
    • biotin biosynthesis from 7-keto-8-aminopelargonate

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links





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