Difference between revisions of "Tiso gene 5675"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycero...")
(Created page with "Category:Gene == Gene Tiso_gene_5675 == * right end position: ** 11005 * transcription direction: ** POSITIVE * left end position: ** 8899 * centisome position: ** 68.0455...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
+
== Gene Tiso_gene_5675 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 11005
−
* common name:
+
* transcription direction:
−
** diacylglycerol_kinase_catalytic_region
+
** POSITIVE
−
** diacylglycerol_kinase
+
* left end position:
−
** sphingosine_kinase_1
+
** 8899
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
+
** 68.04558   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[FAA]]
−
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[orthology-creinhardtii]]
−
* With common name(s):
+
* Reaction: [[FUMARYLACETOACETASE-RXN]]
−
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 ATP[c] '''=>''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_14560]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1163]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1420]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
+
−
** '''7''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-athaliana]]
 +
== Pathways associated ==
 +
* [[TYRFUMCAT-PWY]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=11005}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=8899}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
+
{{#set: centisome position=68.04558    }}
−
* UNIPROT:
+
{{#set: reaction associated=FAA|FUMARYLACETOACETASE-RXN}}
−
** [http://www.uniprot.org/uniprot/Q01583 Q01583]
+
{{#set: pathway associated=TYRFUMCAT-PWY}}
−
** [http://www.uniprot.org/uniprot/P49621 P49621]
+
−
** [http://www.uniprot.org/uniprot/P49619 P49619]
+
−
** [http://www.uniprot.org/uniprot/P51556 P51556]
+
−
** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
+
−
** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
+
−
** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
+
−
** [http://www.uniprot.org/uniprot/O08560 O08560]
+
−
** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
+
−
** [http://www.uniprot.org/uniprot/P20192 P20192]
+
−
** [http://www.uniprot.org/uniprot/P23743 P23743]
+
−
** [http://www.uniprot.org/uniprot/Q06119 Q06119]
+
−
** [http://www.uniprot.org/uniprot/Q03603 Q03603]
+
−
** [http://www.uniprot.org/uniprot/Q39017 Q39017]
+
−
** [http://www.uniprot.org/uniprot/Q09103 Q09103]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=diacylglycerol_kinase_catalytic_region}}
+
−
{{#set: common name=diacylglycerol_kinase}}
+
−
{{#set: common name=sphingosine_kinase_1}}
+
−
{{#set: ec number=EC-2.7.1.107}}
+
−
{{#set: gene associated=Tiso_gene_14560|Tiso_gene_1163|Tiso_gene_1420}}
+
−
{{#set: in pathway=PWY-7817|PWY-7039}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_5675

  • right end position:
    • 11005
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8899
  • centisome position:
    • 68.04558
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5675&oldid=39766"