Difference between revisions of "Tiso gene 5675"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycero...")
(Created page with "Category:Gene == Gene Tiso_gene_5675 == * right end position: ** 11005 * transcription direction: ** POSITIVE * left end position: ** 8899 * centisome position: ** 68.0455...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
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== Gene Tiso_gene_5675 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11005
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* common name:
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* transcription direction:
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** diacylglycerol_kinase_catalytic_region
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** POSITIVE
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** diacylglycerol_kinase
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* left end position:
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** sphingosine_kinase_1
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** 8899
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
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** 68.04558   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FAA]]
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** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[FUMARYLACETOACETASE-RXN]]
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** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 ATP[c] '''=>''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14560]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1163]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1420]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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== Pathways associated ==
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* [[TYRFUMCAT-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=11005}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=8899}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
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{{#set: centisome position=68.04558    }}
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* UNIPROT:
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{{#set: reaction associated=FAA|FUMARYLACETOACETASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q01583 Q01583]
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{{#set: pathway associated=TYRFUMCAT-PWY}}
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** [http://www.uniprot.org/uniprot/P49621 P49621]
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** [http://www.uniprot.org/uniprot/P49619 P49619]
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** [http://www.uniprot.org/uniprot/P51556 P51556]
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** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
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** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
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** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
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** [http://www.uniprot.org/uniprot/O08560 O08560]
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** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
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** [http://www.uniprot.org/uniprot/P20192 P20192]
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** [http://www.uniprot.org/uniprot/P23743 P23743]
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** [http://www.uniprot.org/uniprot/Q06119 Q06119]
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** [http://www.uniprot.org/uniprot/Q03603 Q03603]
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** [http://www.uniprot.org/uniprot/Q39017 Q39017]
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** [http://www.uniprot.org/uniprot/Q09103 Q09103]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=diacylglycerol_kinase_catalytic_region}}
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{{#set: common name=diacylglycerol_kinase}}
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{{#set: common name=sphingosine_kinase_1}}
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{{#set: ec number=EC-2.7.1.107}}
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{{#set: gene associated=Tiso_gene_14560|Tiso_gene_1163|Tiso_gene_1420}}
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{{#set: in pathway=PWY-7817|PWY-7039}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:08, 21 March 2018

Gene Tiso_gene_5675

  • right end position:
    • 11005
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8899
  • centisome position:
    • 68.04558
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5675&oldid=39766"