Difference between revisions of "Tiso gene 2851"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2851 == * right end position: ** 18195 * transcription direction: ** POSITIVE * left end position: ** 17117 * centisome position: ** 93.617...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693] ==
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== Gene Tiso_gene_2851 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 18195
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 17117
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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* centisome position:
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** 93.61737   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[INORGPYROPHOSPHAT-RXN]]
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** 1 [[CPD-7032]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7031]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 3-methylbutanol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-methylbutanal[c]
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_6562]]
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* [[PWY-7805]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7807]]
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***EC-NUMBER
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* [[Tiso_gene_6563]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7649]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=18195}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05685 R05685]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=17117}}
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{{#set: common name=polyketide_synthase}}
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{{#set: centisome position=93.61737    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=INORGPYROPHOSPHAT-RXN|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: pathway associated=PWY-7805|PWY-7807}}
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{{#set: gene associated=Tiso_gene_6562|Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_7649|Tiso_gene_5424}}
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{{#set: in pathway=PWY-5076|PWY-6871}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:23, 21 March 2018

Gene Tiso_gene_2851

  • right end position:
    • 18195
  • transcription direction:
    • POSITIVE
  • left end position:
    • 17117
  • centisome position:
    • 93.61737
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2851&oldid=41332"