Difference between revisions of "TRANS-CINNAMATE-4-MONOOXYGENASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_1398 == * left end position: ** 16012 * transcription direction: ** POSITIVE * right end position: ** 21490 * centisome position: ** 67.046...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1398 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
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* left end position:
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* direction:
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** 16012
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11]
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* right end position:
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** 21490
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* centisome position:
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** 67.04631   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.2.1.23-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-674]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 oxygen[c] '''+''' 1 trans-cinnamate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 4-coumarate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
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* [[BETAGALACTOSID-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_1547]]
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* [[KETOLACTOSE-RXN]]
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** Source: [[orthology-athaliana]]
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** in-silico_annotation
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* Gene: [[Tiso_gene_8263]]
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***ec-number
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RXN-12398]]
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* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
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** in-silico_annotation
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** '''1''' reactions found over '''2''' reactions in the full pathway
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***ec-number
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** [[pantograph]]-[[esiliculosus]]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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* [[RXN-12399]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[orthology]]
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***ec-number
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** Tool: [[pantograph]]
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* [[RXN-12400]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[PWY-6807]]
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* [[BGALACT-PWY]]
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* [[LACTOSEUTIL-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=16012}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608]
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{{#set: right end position=21490}}
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* LIGAND-RXN:
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{{#set: centisome position=67.04631    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
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{{#set: reaction associated=3.2.1.23-RXN|BETAGALACTOSID-RXN|KETOLACTOSE-RXN|RXN-12398|RXN-12399|RXN-12400}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6807|BGALACT-PWY|LACTOSEUTIL-PWY}}
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** [http://www.uniprot.org/uniprot/Q04468 Q04468]
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** [http://www.uniprot.org/uniprot/P37115 P37115]
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** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
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** [http://www.uniprot.org/uniprot/P48522 P48522]
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** [http://www.uniprot.org/uniprot/Q42895 Q42895]
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** [http://www.uniprot.org/uniprot/O81928 O81928]
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** [http://www.uniprot.org/uniprot/O24315 O24315]
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** [http://www.uniprot.org/uniprot/Q43033 Q43033]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.14.13.11}}
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{{#set: gene associated=Tiso_gene_1547|Tiso_gene_8263}}
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{{#set: in pathway=PWY1F-467|PWY-1121}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:09, 21 March 2018

Reaction TRANS-CINNAMATE-4-MONOOXYGENASE-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-467, phenylpropanoid biosynthesis, initial reactions: PWY1F-467
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

External links




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