Difference between revisions of "RXN-2542"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-XYLULOSE D-XYLULOSE] == * smiles: ** C(O)C(O)C(O)C(=O)CO * inchi key: ** InChIKey=ZAQJHHRNXZU...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] == * direction: ** LEFT-TO-RIGHT * common name: ** mpbq_msbq_methyltransferase *...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-XYLULOSE D-XYLULOSE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] ==
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* smiles:
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* direction:
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** C(O)C(O)C(O)C(=O)CO
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N
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* common name:
 
* common name:
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** D-xylulose
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** mpbq_msbq_methyltransferase
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* molecular weight:
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* ec number:
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** 150.131   
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** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
 
* Synonym(s):
 
* Synonym(s):
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** xylulose
 
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** D-threo-pentulose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[XYLULOKIN-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DMPBQ]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11392]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2596]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 551-84-8
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* LIGAND-RXN:
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* METABOLIGHTS : MTBLC17140
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** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
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* DRUGBANK : DB03947
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=mpbq_msbq_methyltransferase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5289590 5289590]
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{{#set: ec number=EC-2.1.1.295}}
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* HMDB : HMDB01644
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{{#set: gene associated=Tiso_gene_11392|Tiso_gene_2596}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-1422}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00310 C00310]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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** [http://www.chemspider.com/Chemical-Structure.4451524.html 4451524]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17140 17140]
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* BIGG : xylu__D
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{{#set: smiles=C(O)C(O)C(O)C(=O)CO}}
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{{#set: inchi key=InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N}}
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{{#set: common name=D-xylulose}}
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{{#set: molecular weight=150.131    }}
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{{#set: common name=xylulose|D-threo-pentulose}}
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{{#set: consumed by=XYLULOKIN-RXN}}
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Latest revision as of 19:09, 21 March 2018

Reaction RXN-2542

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mpbq_msbq_methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-phytyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 S-adenosyl-L-homocysteine[c] + 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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