Difference between revisions of "RXN-7784"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 T...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** glycogen degradation I
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** dihydroflavonol-4-reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
 
* Synonym(s):
 
* Synonym(s):
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** glycogen catabolism I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[GLUCOKIN-RXN]]
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** 1 [[CPD-7087]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_3107]]
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** 1 (+)-dihydromyricetin[c] '''+''' 1 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 NADP+[c]
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*** [[Tiso_gene_1303]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_9504]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[GLYCOPHOSPHORYL-RXN]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_15272]]
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*** [[Tiso_gene_1011]]
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** Source: [[orthology-esiliculosus]]
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** 1 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_9503]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PHOSPHOGLUCMUT-RXN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_11016]]
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*** [[Tiso_gene_13477]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_4816]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
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*** [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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*** [[manual-primary_network]]
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* Category: [[orthology]]
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* [[RXN-9025]]
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** Source: [[orthology-athaliana]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_1011]]
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** Source: [[orthology-esiliculosus]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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* [[RXN0-5182]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_1011]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN0-5183]]
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** 4 associated gene(s):
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*** [[Tiso_gene_599]]
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*** [[Tiso_gene_600]]
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*** [[Tiso_gene_4953]]
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*** [[Tiso_gene_4952]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=AMYLOMALT-RXN AMYLOMALT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5146 RXN0-5146]
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glycogen degradation I}}
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{{#set: common name=dihydroflavonol-4-reductase}}
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{{#set: common name=glycogen catabolism I}}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: reaction found=6}}
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{{#set: gene associated=Tiso_gene_9504|Tiso_gene_15272|Tiso_gene_9503|Tiso_gene_11016}}
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{{#set: total reaction=8}}
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{{#set: in pathway=PWY-5152}}
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{{#set: completion rate=75.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:09, 21 March 2018

Reaction RXN-7784

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydroflavonol-4-reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (+)-dihydromyricetin[c] + 1 NADPH[c] + 2 H+[c] => 1 (2R,3S,4S)-leucodelphinidin[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5152, leucodelphinidin biosynthesis: PWY-5152
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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