Difference between revisions of "PWY-1801"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=7KAPSYN-RXN 7KAPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1801 PWY-1801] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=7KAPSYN-RXN 7KAPSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1801 PWY-1801] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/2.3.1.47 EC-2.3.1.47]
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* common name:
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** formaldehyde oxidation II (glutathione-dependent)
 
* Synonym(s):
 
* Synonym(s):
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** formaldehyde oxidation II (GSH-dependent)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-558]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''=>''' 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN-2962]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H+[c] '''+''' 1 pimeloyl-CoA[c] '''+''' 1 L-alanine[c] '''=>''' 1 8-amino-7-oxononanoate[c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_18459]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[S-FORMYLGLUTATHIONE-HYDROLASE-RXN]]
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* [[Tiso_gene_3555]]
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** 1 associated gene(s):
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_10446]]
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** [[pantograph]]-[[esiliculosus]]
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** 3 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-6578]], 8-amino-7-oxononanoate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6578 PWY-6578]
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*** [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2961 RXN-2961]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20712 20712]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-1801 PWY-1801]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03210 R03210]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=formaldehyde oxidation II (glutathione-dependent)}}
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** [http://www.uniprot.org/uniprot/Q58694 Q58694]
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{{#set: common name=formaldehyde oxidation II (GSH-dependent)}}
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** [http://www.uniprot.org/uniprot/O84782 O84782]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q9Z6Y3 Q9Z6Y3]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P0A4X4 P0A4X4]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q9K0U0 Q9K0U0]
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** [http://www.uniprot.org/uniprot/Q9PLE6 Q9PLE6]
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** [http://www.uniprot.org/uniprot/P44422 P44422]
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** [http://www.uniprot.org/uniprot/O25320 O25320]
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** [http://www.uniprot.org/uniprot/P53556 P53556]
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** [http://www.uniprot.org/uniprot/Q9PIJ3 Q9PIJ3]
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** [http://www.uniprot.org/uniprot/O66875 O66875]
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** [http://www.uniprot.org/uniprot/Q9ZLN3 Q9ZLN3]
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** [http://www.uniprot.org/uniprot/Q9Z6L6 Q9Z6L6]
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** [http://www.uniprot.org/uniprot/Q9JT28 Q9JT28]
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** [http://www.uniprot.org/uniprot/P22806 P22806]
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** [http://www.uniprot.org/uniprot/P45487 P45487]
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** [http://www.uniprot.org/uniprot/P74770 P74770]
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** [http://www.uniprot.org/uniprot/P12998 P12998]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.3.1.47}}
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{{#set: gene associated=Tiso_gene_3555}}
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{{#set: in pathway=PWY-6578}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:10, 21 March 2018

Pathway PWY-1801

  • taxonomic range:
  • common name:
    • formaldehyde oxidation II (glutathione-dependent)
  • Synonym(s):
    • formaldehyde oxidation II (GSH-dependent)

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-1801&oldid=39901"